Gene Rfer_0905 details

Gene Information

• Locus tag: Rfer_0905
• ID: 3963621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 947792
• End bp: 948313
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637915733
• Product: CheD, stimulates methylation of MCP proteins
• Protein accession: YP_522184
• Protein GI: 89899713
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGCA AGAAGAAACC GATTGATATT TTTTTGCAGC CGGGCGAATA TTTTGTCGCC 
GACGCTGGCT ACCAGATTCG CACCATGCTG GGCTCGTGTG TGTCGATCAC CTTGTGGCAC 
CCAGCGACAC GCCAGGGTGC AATGTCACAT TTTTTGCTTC CCACACGCGG CGCGTCCAAG 
CCCAAACAAA CGCTGGACGC ACGCTATGGC GACGAGGCGC TGAAGCTGAT GCTGATTGAG 
CTGCAGCGCC TGGGCATACC CTCGGCGCAG TGCCAGGGCA AGATATTTGG CGGCGGCAAT 
ATGTTTCCGG GCAACTTGCG CTCTGGCGCC TTGAACGTCG GGCAACGCAA CGGCGAAGCA 
GCGCTGACCT TGTTGCGTGA ACACGGGATT CCCGTCATGT CCGAGAGCCT GTTTGGCATT 
GGCCACCGAC AAATCGTTTT TGATGTCAGC AATGGCGATG TCTGGTCGCA CCAGGTCATG 
CCCATCGGGA CCGACTCCGG GGATAAAGGA GATTTACTGT GA 

 

Protein sequence

MSRKKKPIDI FLQPGEYFVA DAGYQIRTML GSCVSITLWH PATRQGAMSH FLLPTRGASK 
PKQTLDARYG DEALKLMLIE LQRLGIPSAQ CQGKIFGGGN MFPGNLRSGA LNVGQRNGEA 
ALTLLREHGI PVMSESLFGI GHRQIVFDVS NGDVWSHQVM PIGTDSGDKG DLL