| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0896 |
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| Symbol | |
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| ID | 3963612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 937478 |
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| End bp | 939997 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637915724 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_522175 |
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| Protein GI | 89899704 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.335338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAT TCAAATTTGA GTGGAACTCG CTCAAAACGC GTGTAACGCT GCTCACATTG
GGGATCTTTG TGATCAGCAT CTGGTCGCTG ACTTTTTACA CGGGTCGTAT GCTGCGCGAG
GACATGCAAG GTCTGCTGGG CGAACAGCAA TTCTCAACGG CCTCCCTGAT AGCCGCAGAG
ATAGACCGAG AGGTGGCCGA TCGCGTGCAG GCACTAGAGA TCACGGCCAG AGAAATCACC
CCAACCATAA TCAACAACCC GGTGGCCTTG CAAGCATTGT TCGCACATCA GCCGCTGTTA
CATCATTTGT TTAATGATGG CATCGCCTCC ACCGGTCCGA CTGGCACGGT GATTGCCGAT
TATCCTCAGG TGCCAGGGCG GATTGGCGCC AATTTCATGG AGCGCGATTA CATCATCGGC
CCGCTCAAGA ATGGCAAGGC GACGATAGGC AAGCCGGTAC ACAGCAAGCT CACGCAGGAC
CCAAGTTTTG TGATGGCGGT ACCCATCAAA GATACTGCGG GACGGGTCAT TGGGGTGCTG
GCCGGCATCA TCAACCTGAA CAAGCCCAAT TTTGTGACGA CAAGCACAGG CGGCTATGAC
AGCAAGGGTG GCGACTTTTT TTTGGTGGCA CCGCAGCACC AGATCGTTGT CGCCAGCTCC
AACAAAAGCC GCATCTTGGC AACGTTGCCT GCCCCGGGCG TCATCCCCGC GCTCGACCGC
CAGGCGCAAG GGTATGAGGG GACTCAAATC TTCGTCAATC CGCTGGGGTT TGAGGTGCTG
ACCTCGGCCA AGCAGATACC GTCCGCTGGC TGGTACATTG CCATCACGCT AGACACCAGA
AGAGCTTTTG CCCCGATTAA GGTTATGCAG CAGAACATGC TGCTCGCGGC CTGCGTGCTG
ACCCTCCTCG TCACCGGACT CCTGTGGGAG ATGTTGCGCC GTCAACTGAC GCCATTGCTT
GCCACTGCCA AGGCACTCGC CCGCATGGCC GATTCGAAGG AATTCCCGAG CGCCTTGCCG
ATTGCCCGAC ACGATGAAGT GGGCCACCTG ATTGGCGGGT TCAACCAACT GCTGGTTTCA
TTGCACGAGC GCGATGCCGC ACTGAGTGAG AGTGAGGCCC GCTTTCGCAC CCTGATCGAA
TGGACGCCTG AAGCGGTCGC TGTGCACCGC GGTGGGAAAT TGCTTTACGC CAATCCGGCA
GCCCTTCATA TGTTTGGCGC AACATCCAAG CAAGACCTGG TGGGAAAACC CATGCTCGAG
TTTGTTCACC CGGACTATCG GCACAGTGTG GTGGAGCGGA TGCAGCGCAG TTACGACAAA
AACCTCCACC CGCCCATGGC GGAAGAAAAA TTCCTCAAAC TCGATGGCAC TGTGATTGAT
GTGGAAGTGA CGGGCATCGT GATCAATTAC GATGGCCAGA GCGCCACTCA GGTGGCAATA
CACGACATCA CCGAGCGCAA ACTTGCAGAA GATCAGTTGC GCACCCTCTC ACACATTGTC
GAGCAGGCGC CGTTATCCAT TCTTATCACT GATCTCGATG GCAACATCAA ATACGCCAAC
CCCTGGATTA CGAAGGTCAC CGGCTACAGC GCTGAAGAAA TCTGTGGTCA AAACCCGCGC
CTTTTCAAGA CTGACCAGAC ACCGCTCGAG GTCTATCAGG ATTTGTGGCA AACCCTGCGC
GCCGGGGGTG TGTGGCGCGG GGAATTTGGC AATCGCAAGA AGAACGGCGA CGTGTTCGTG
GAACAGGCTG TGATTGCCCC GGTGTTGGAC GATGCTGGTC GCACGGCCCA CTACGTTGCA
CTCAAAGAAG ACGTCACAGA ACGCAAGCGC ACAGAGCGTG CCCTGCAGAC CTCCTTGCAA
GAAAAGGTGG CACTGCTCAA CGAGGTGCAT CACCGCGTCA AGAACAACTT GCAGGTCATC
ACCAGCCTGC TGCGTCTTGA AGCCGGGCGC AGCAGCCAGC CTGACACCAA GTCGGTGCTC
ACAGACATGC AGGGTCGCAT CCGGTCCATG GCGCTGTTGC ACGAGTCGCT GTACCGCACC
GGCACGTTTG CCTCGGTGGA TTTGGGCGCT TACCTCAAAC AGCTCGCCAG CCAGACCTTT
CGGGCGCAAA GCAGTGGCGC CGTGCGGCTG GAATTGGAAC TGGCGACCGT TCAAGTCAGC
ATGGACCAGG CCACGCCATG CGGTTTACTG GTCAACGAGC TCATCAGTAA CTGCCTCAAA
CACGGCTTTC CTGAGGGCCG CAGTGGTGAA ATCCGCATAG AACTACATGC GATGGCAACG
GCAACTGTAG CGCCAGCAAC CGAGGGTGGC GCGGCGCAGT GGCTGCTGCG CGTGAGCGAC
ACCGGCGTTG GCTTGCCAGC CGACTTTAAG GCCAGGCGCC ACCAGTCACT TGGCCTGCAA
CTGGTGGCCG ACTTGGTCCA CCAGCTCGGC GGCACACTGG ACATTGGGTC GGCACCTGGC
GCAGTGTTTA CTGTGGTGTT CACACCGGAT GCGCCAAGCT CAACAATGGG TGCGGTCTGA
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| Protein sequence | MRRFKFEWNS LKTRVTLLTL GIFVISIWSL TFYTGRMLRE DMQGLLGEQQ FSTASLIAAE
IDREVADRVQ ALEITAREIT PTIINNPVAL QALFAHQPLL HHLFNDGIAS TGPTGTVIAD
YPQVPGRIGA NFMERDYIIG PLKNGKATIG KPVHSKLTQD PSFVMAVPIK DTAGRVIGVL
AGIINLNKPN FVTTSTGGYD SKGGDFFLVA PQHQIVVASS NKSRILATLP APGVIPALDR
QAQGYEGTQI FVNPLGFEVL TSAKQIPSAG WYIAITLDTR RAFAPIKVMQ QNMLLAACVL
TLLVTGLLWE MLRRQLTPLL ATAKALARMA DSKEFPSALP IARHDEVGHL IGGFNQLLVS
LHERDAALSE SEARFRTLIE WTPEAVAVHR GGKLLYANPA ALHMFGATSK QDLVGKPMLE
FVHPDYRHSV VERMQRSYDK NLHPPMAEEK FLKLDGTVID VEVTGIVINY DGQSATQVAI
HDITERKLAE DQLRTLSHIV EQAPLSILIT DLDGNIKYAN PWITKVTGYS AEEICGQNPR
LFKTDQTPLE VYQDLWQTLR AGGVWRGEFG NRKKNGDVFV EQAVIAPVLD DAGRTAHYVA
LKEDVTERKR TERALQTSLQ EKVALLNEVH HRVKNNLQVI TSLLRLEAGR SSQPDTKSVL
TDMQGRIRSM ALLHESLYRT GTFASVDLGA YLKQLASQTF RAQSSGAVRL ELELATVQVS
MDQATPCGLL VNELISNCLK HGFPEGRSGE IRIELHAMAT ATVAPATEGG AAQWLLRVSD
TGVGLPADFK ARRHQSLGLQ LVADLVHQLG GTLDIGSAPG AVFTVVFTPD APSSTMGAV
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