| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0878 |
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| Symbol | |
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| ID | 3963652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 915638 |
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| End bp | 916822 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637915706 |
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| Product | histidine kinase, HAMP protein |
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| Protein accession | YP_522157 |
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| Protein GI | 89899686 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCG CAACGTTCAA GGGAAGTATT CGAGTCAAGA TGCTGGGCGG CGTGCTGGCC
CTCGAAATCT TGCTGGCAGC CTGTTACGCG GGCGTTCTGT ATTACTCTGC GAGTCAGAGT
ATTAATTTGA ATGCCCAGAA GGCGGTAGAG CAATCGCAAG GCGTTTTCGA CCTTCTGGTG
CAGAACGATG CCAAGATGCT CGGTGCGGCC ATGGATTCCT TTGCCACCAA TGCTGCGGTC
AGCCAAATCT ACACCGAGCA TCAGGATCGG CAGGCGCTCA TAGCTGCCGT GCAGGATATC
TATCGCAGCA ACAAGTCCCG CTACGGCATC ACACACATGT ACTTCATCGA CAAGAACGGA
ACGTGCTTTC TGCGCGCGCA TTCGACAGGA TTATTTGGTG ACGCCATTGA CCGTGAAACA
TTCCTGCGCG CTCGCGCGTC GGGACAAGAG GCGAGCGGGA TCGAACTCGG CAAGACTGCT
TTCGCGCTGC GCCGGGTCAT GCCTTACCTC CACAATGGAA ACGTGGTGGG CTACCTGGAA
TTCGGCGAGG AGATTGACCA TTTTGATCGT CTGATGAAGA AGCAAACCGG TATTGATGTC
GCCGTTCTGG TGGAGAAGAA TTTTCTCAAT GAAGACGATT ACCGGGGTGC CCTGAAGGCG
AAGAACCAGA TCGATAACTG GGATGCCATG AAGGACTATG TCATGGTCAG CAGCACCATG
AACGACCTCA AGACGGCGGC TTCTGTGACC TCGGGTGCGG AAGTCCATTC GGTCAAGACC
CCCACCTATC TGGGCACGGT CGCTAACGGT TCTTCCACCT TCGCGCGCGG TGCCTTCCCA
CTCAAGGACT CGGCGGGAAA ACAGGTCGGT GTCGTGCTGG CGCTGAGTGA TGTGACCGAC
CAGATTCACA GCCAGCGATC AGCGATGCTC TACCTTATCC TTATCACGGT GGTGATTTCT
GTATTGAGCT TCATTGGGGC GCTGCTGTAC CTGCGGGCCG CGATTATCAA TCCTTTGGTG
CTGCTGGCAC AGCAGGCCAA CGACATCAGC ATGGGCAACG TCGACAAAAA ACTGGAAACA
CAGAGGCAGG ACGAAATCGG GCTTCTGATC CACGCTTTCG AGCGTATGAG ACTGAGCTTG
AAGAAGTCCC TGTCCATGTT GACCAAGAGA GCCGAGCAAG GCTGA
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| Protein sequence | MSLATFKGSI RVKMLGGVLA LEILLAACYA GVLYYSASQS INLNAQKAVE QSQGVFDLLV
QNDAKMLGAA MDSFATNAAV SQIYTEHQDR QALIAAVQDI YRSNKSRYGI THMYFIDKNG
TCFLRAHSTG LFGDAIDRET FLRARASGQE ASGIELGKTA FALRRVMPYL HNGNVVGYLE
FGEEIDHFDR LMKKQTGIDV AVLVEKNFLN EDDYRGALKA KNQIDNWDAM KDYVMVSSTM
NDLKTAASVT SGAEVHSVKT PTYLGTVANG SSTFARGAFP LKDSAGKQVG VVLALSDVTD
QIHSQRSAML YLILITVVIS VLSFIGALLY LRAAIINPLV LLAQQANDIS MGNVDKKLET
QRQDEIGLLI HAFERMRLSL KKSLSMLTKR AEQG
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