| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0871 |
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| Symbol | |
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| ID | 3963782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 909177 |
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| End bp | 909845 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915699 |
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| Product | pyrrolidone-carboxylate peptidase |
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| Protein accession | YP_522150 |
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| Protein GI | 89899679 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGCCG CTGCCCCACT GCGTATTTTG CTCACCGGCT TCGAGCCCTT CGAGCGCGAT
CCCGTCAACC CGTCATGGGA GGTGGCGCGC GCGCTGGACG GTTCGTCTTG TGATGGCGCC
ACGTTGCATG CCGTGCAATT GCCGTGCGTC TTTGGCCCCG CCATCGAGCG CCTGGATGAG
GCGCTGGTCC AGTGGCAACC GCAGCTGGTG CTGGCGCTGG GACTGGCGGG CGGGCGCAGC
GAGGTGTCGC TGGAGCGGGT CGCCATCAAT GTGATTGATG CCCGTATTGC CGACAACGCG
GGCCAGCAGC CGATTGACGC CCCCGTGATT CACGGCGCAC CGGCAGCCTA CTTTTCGACG
CTGCCGATCA AAGCCATCAT GCGTGACTTG CGCGCCGCCG GGTTGCCGGG CGCGGTGTCC
AACACCGCAG GCACCTTTGT CTGCAACCAG GTGTTCTATG CCTTGATGCA CCGCCTGGCC
AGCGAACCGG CTTGGTCGCA AACCCGCGGT GGGTTCATCC ACCTGCCTTA TCTGCCCGAG
CAAGCGGCCC GCCTCCCCGG CGCGCCCAGC ATGGCGCTGG CCACCCAGGT GCAGGCGCTG
CAGGTGGCGA TGCGCACCGC CCTGTCCGTG CGCGTTGACG TGCGCGAGAG CGCAGGCCAA
TTGCATTGA
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| Protein sequence | MPAAAPLRIL LTGFEPFERD PVNPSWEVAR ALDGSSCDGA TLHAVQLPCV FGPAIERLDE
ALVQWQPQLV LALGLAGGRS EVSLERVAIN VIDARIADNA GQQPIDAPVI HGAPAAYFST
LPIKAIMRDL RAAGLPGAVS NTAGTFVCNQ VFYALMHRLA SEPAWSQTRG GFIHLPYLPE
QAARLPGAPS MALATQVQAL QVAMRTALSV RVDVRESAGQ LH
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