| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0845 |
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| Symbol | |
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| ID | 3964068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 883332 |
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| End bp | 884420 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915674 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_522125 |
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| Protein GI | 89899654 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.558114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT ACAAAATTGC CTGTATTCCA GGTGATGGGA TCGGAAAGGA AGTCGTGCCA
GCGGGGCAGA CCGTACTGGA GGCACTGGCG GCGTCCAGCA ACACGTTCAA GTTCGAGTTC
GAGAACTTCG GCTGGGGCGG TGATTGGTAC CGCGCACACG GCGCCATGAT GCCAGCCGAC
GGACTGGACG CGTTGCGCGG CAAAGATGCG ATTTTGTTTG GCTCTGCAGG TGACCCGGAC
ATCCCTGACC ACATCACACT CTGGGGCTTG CGTCTCAAAA TCTGTCAGGG CTTTGACCAG
TACGCCAATG TGCGCCCCAC CCGCATCCTG CCTGGCATCG ACGCGCCGCT GAAACGCTGC
AGGCCCGAGG ACCTGGACTG GGTCATCGTG CGCGAGAATT CGGAGGGTGA GTATTCGGGT
GTGGGTGGCC GCGTCCACCA AGGCCAGCCG ATCGAGGCCG CCACCGATTT GTCGATGATG
ACCCGCGCTG GCGTCGAGCG CATCATGCGC TACGCCTTCA AGCAGGCTCA GTCCCGTCCG
CGCAAGTTGT TGACCGTGGT CACCAAGTCC AACGCACAAC GCCATGCCAT GGTCATGTGG
GATGAGATCG CAGTGCAAAT TTCAAAAGAG TTTCCCGATG TAACGTGGGA TAAAGAACTG
GTGGACGCCG CAACGGCCCG CATGGTGAAC CGTCCGGCCA CACTGGACAC CCTTGTTGCG
ACCAACCTGC ATGCCGACAT CCTGAGTGAC CTGGCCGCGG CACTGGCTGG CAGCCTGGGC
ATCGCACCCA CCGCCAACAT CGATCCCGAG CGCCGCTACC CTTCGATGTT TGAACCCATC
CACGGTTCAG CCTTTGACAT CATGGGCAGA GGCTTGGCCA ACCCGGTCGG CACCTTCTGG
TCGGTGGTGA TGCTGTTGGA GCACCTGGGC GAGTTGGAGG CCGCCAGGCG CCTCATGCAA
GCCATCGAGC AAGTCACCGC CAACCCGGCC CTGCACACCC GTGACCTGGG CGGCAAAGCC
ACCACAACCG AGGTGACGCA GGCCGTGTGC AGCCAACTGG CCAAAAGCTC CAAGGGCAAA
GGCGCATGA
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| Protein sequence | MKTYKIACIP GDGIGKEVVP AGQTVLEALA ASSNTFKFEF ENFGWGGDWY RAHGAMMPAD
GLDALRGKDA ILFGSAGDPD IPDHITLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC
RPEDLDWVIV RENSEGEYSG VGGRVHQGQP IEAATDLSMM TRAGVERIMR YAFKQAQSRP
RKLLTVVTKS NAQRHAMVMW DEIAVQISKE FPDVTWDKEL VDAATARMVN RPATLDTLVA
TNLHADILSD LAAALAGSLG IAPTANIDPE RRYPSMFEPI HGSAFDIMGR GLANPVGTFW
SVVMLLEHLG ELEAARRLMQ AIEQVTANPA LHTRDLGGKA TTTEVTQAVC SQLAKSSKGK
GA
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