| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0804 |
|---|
| Symbol | |
|---|
| ID | 3963968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 841784 |
|---|
| End bp | 842635 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637915634 |
|---|
| Product | YecA |
|---|
| Protein accession | YP_522085 |
|---|
| Protein GI | 89899614 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
|---|
| TIGRFAM ID | [TIGR02292] yecA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCC AAACCATGAA CAAAGCCAGC ACCATGAGCC CAGCATCCAG CAGCGCAGCA
GACCCTCTCG TCGGCTTTCC GATAGAGCCT TTGAGCCCGC AAGAGTTTGA CGAAGTCGAT
GCCATTCTGG ACGACCTGCG CACCCGCTAC GACGAGACGC CGCAGTGGGA GTTTTGCGAA
GGCTTCATGG CGGCGCTGAT CTGCTGCCGC CGACTGATCA TGCCCTCGGA GTACCTGCCC
GTGTTGTTGG CCATTGGTGA CGAAGGCGTG CAGGATGAAG GCTCGTTTGC CGACGACGCC
CAGCAACAGC GCTTTTTCGA GCTGTGGACA CGGCGCTGGA ACGACGTGGC CCAGGCGCTC
AATGCCAAGG TGGAAGATCT GGGCGACGAG GCCGCTTACT TTCCCGAGGT GGTGGATATA
CGTGGCGCCG TAGCCTCGCT GTCCGAGGAG GCACGCGCCG AAATAGGCCC TGAAACAGCG
CCGTCGTATG CGCAAATATG GGCGCTGGGC TTCATGTATG CGGTGGAGAG CTGGCCCGAA
GAATGGGCGG CGCCGCGCGA CAAAGAGGCA GCCCAGTGGC TGGACGAGGC GCTCGATGCC
ATTGTGGCCC TGACTGACGA CGACACCGAC CCACCCACGC TGTCGGTCTA CGATGAAAAC
GGCGCACCCA GCGTCAGCGC CCAGCGCCTG GATGCTTATG CCAGCGCGAT CTGGGCCGTG
TACGACCTGC GCGAACTCTG GCGCACCCTG GGGCCACGCC AGCAGACCGT GCACAAGGCG
CCCACACCCG GTCGCAACGA TCCCTGTCCT TGTGGCAGTG GCAAGAAATA CAAGAAGTGC
TGCGGGGCGT GA
|
|---|
| Protein sequence | MISQTMNKAS TMSPASSSAA DPLVGFPIEP LSPQEFDEVD AILDDLRTRY DETPQWEFCE
GFMAALICCR RLIMPSEYLP VLLAIGDEGV QDEGSFADDA QQQRFFELWT RRWNDVAQAL
NAKVEDLGDE AAYFPEVVDI RGAVASLSEE ARAEIGPETA PSYAQIWALG FMYAVESWPE
EWAAPRDKEA AQWLDEALDA IVALTDDDTD PPTLSVYDEN GAPSVSAQRL DAYASAIWAV
YDLRELWRTL GPRQQTVHKA PTPGRNDPCP CGSGKKYKKC CGA
|
|---|
| |