Gene Rfer_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0776 
Symbol 
ID3964194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp813018 
End bp813659 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID637915606 
ProductOstA-like protein 
Protein accessionYP_522057 
Protein GI89899586 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.896639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT CACTTTCCAC TGTGCTTTTG CTGGCGGCCC TGGCGCCGGG TGCAAGCCTG 
GTTCGAGCTG AACAAGCCGA CCGCAACAAG CCCATGAATG TGGAAGCCGA TGCCTTGCGT 
TATGACGACG CCAAGAAAAC CAGCGTGTTT ACCGGCCGTG TCGTGTTGAC CAAAGGCTCG 
ATTCTGATCC GGGGCGCCCG CATTGAAGTG CGCCAGGACC CCGAAGGCAA CCAGTATGGC 
CTGGTCACGG CCGAGCCCGG CAAACTCGCG TCTTTCCGTC AAAAGCGGGA AGGGCTGGAT 
GAGTTTATTG AGGGCCAGGG CGAAAGCATC GAATACGACA GCCGTGCCGA CACCGTGAAA 
TTCAACAAGC AGGCGCAATT GCGCCGTTAC CTGGGCGCGA CGCTGAACGA CGAGATGAGC 
GGCGGCGTGA TTGTTTACAA CAACAGCACC GACGTGTTCA CCGTTGATGG CGGTGTGGCC 
CAAGGAGCGC CGAGCGCGAC AGGCGGCCGC GTGCGTGCCA TGCTGACGCC GAAACCCAAT 
GCCGCCGCAG CGGCAGCGGC GGCAACGGCG CCCGCCAATG CAGCTTCAGC GCCAGCCGAT 
GCGCTGCGCG CCACCACGAC GCTGGGCGGG GATAAGAAGT GA
 
Protein sequence
MKLSLSTVLL LAALAPGASL VRAEQADRNK PMNVEADALR YDDAKKTSVF TGRVVLTKGS 
ILIRGARIEV RQDPEGNQYG LVTAEPGKLA SFRQKREGLD EFIEGQGESI EYDSRADTVK 
FNKQAQLRRY LGATLNDEMS GGVIVYNNST DVFTVDGGVA QGAPSATGGR VRAMLTPKPN 
AAAAAAAATA PANAASAPAD ALRATTTLGG DKK