| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0748 |
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| Symbol | |
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| ID | 3960151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 783599 |
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| End bp | 785773 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915578 |
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| Product | cytochrome c biogenesis protein, transmembrane protein |
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| Protein accession | YP_522029 |
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| Protein GI | 89899558 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00532426 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGCC TGAAATTACC CCATCGCCTT ATTTTTGCTA CTTTATTTGT AGCATTTTGT
ACAATAACGA CAGGGGCTAG AGGCCAAAAT ATCCCCCAAT CCGTGGTCAA CACCGAACAG
GTGCGGGCCG AGTTGATGGT GCAGGCCCCG GATGGCGCCG ACGCGGGAAA ATCGGTCTGG
GTGGGTCTGC AATTGACGCA CCTGCCGGAG TGGCACACCT ACTGGAAAAA CCCGGGTGAC
TCCGGCTTGC CCACCACGCT GCAATGGACG CTGCCCGCGG GCGTGACGGC GGGCGAGATC
GCCTGGCCCT TGCCGAAAAA AATTCCGCTT GGCAACCTGA CCAATTATGG CTACGAGGGC
ACGGTGTTGC TGCCGGTACC TTTGAGCATC TCACCCGCGT TCAAGCCGTC GCCGCAGAGC
AGCGGCCTCG AAATCAAACT CAAGGCCACT TGGCTGGTCT GCCGGCTCGA ATGCGTGCCG
CAAGACGGCG AATTTGTCCT GAACGTGCCG GTGCGCGGCT CCACCGCGCT CAACAGCGCG
GCTTTCACCG CCAGCCTCAA GGCCCAGCCT GCCGCGCTGG AAGGCGACAG CCGGGTGGCG
GTGGATGGCA AGCAGCTCAA GCTGACCGTG GTCGGCCTGC CGCCGACGCT GCGTGGCAAA
CAACTGGAGT TCTTCCCGGA GACGCCCGAG CTGATCGACC CTGCGGCGAC CTGGTCACAG
CAATGGACAA AAAACGGGCA GGGCGACGTC TGGACCGCCA GCGTGCCTTT GTCAGGACTT
CGCAGCGAGA GCCCGGCGCT GATACCGCTG GTGTTGGTGG CTGACGTCAA CGGCCAGCGG
CAAGGTTTTC GGGCCCAGGC CCAGGTGCTG GGCAATTGGC CGCCGGTGGC GGGCGTGGCC
GGCAGCAGCC CGCCTGGGCT GGCCCCGGCT CTGGCCAGCA CCACAGCCCC GACTGGCCCC
CAGGTTTCGT TCGGCCTGTG GGCGGCGCTG CTGGGTGCAC TGCTGGGCGG CATGATCCTC
AACCTGATGC CTTGTGTGTT TCCGGTGCTG GCGATCAAGG TGATGAGTTT TACCCGTCAT
GCCCATGACC GGCGTGGCCA CCGCATCAGC GGCCTGGCCT ACAGCGCCGG TGTGGTGCTC
TCGTTTCTGG CGCTGGGCGC GCTGCTGATC GGCTTGCGCA GCGCGGGCGA GCAACTGGGC
TGGGGCTTTC AGTTGCAGTC GCCGGCGGTG GTGGCGGCGC TGGCGGTGTT GTTCACCGTG
ATGGGCCTGA ACCTGGCGGG CCTGTTTGAG TTTGGCCGCT TTTTGCCCAA CGCGGTGCTG
ACGCTGGAGG CCAAAAACCC GGCGGTCAAC GCCTTTTTGT CGGGCGTGCT CGCGGTCGCC
ATTGCCTCGC CCTGCACCGC GCCCTTCATG GGCGCATCGC TAGGCTTGGC GCTGGGCCTG
CCGCCGCTGC AGGCCTTGCT GATTTTCATG ACGCTGGGCA TCGGCATGGC GCTGCCGTAT
CTGGCCGCCA GCCTGACCCC GGCAGTGGCG CGCTGGCTGC CGCGCCCCGG CGCCTGGATG
GACACCTTCC GCCGGGCCAT GGCGTTCCCA ATGTTTGCCA CCGTGGTCTG GCTGGTGTGG
GTGCTGGGTC AGCAAAGTGG CATTGACGGC GCCGCCGCCT TGCTGGCGCT GCTGCTGAGC
TTGAGTCTGG TGCTCTGGTC GCTGACACTC ACGGGCCGCA GCCGGGTCGT GATAGCTACT
ATTTCAATAG CAACTCTCAC CCTGTTGACG GGGGCTATCG GCCAGAATGT CATCAAGATG
GCAGGCGCCT CCCGGGTTGC CAGCGATAGC CGCTGGCAAC TCTGGGCACC CGGGCGGGTG
GAACAAGTGC TGGCCACGGG AGCGCCGGTG TTTGTCGACT TCTCCGCCGC CTGGTGCGTC
ACCTGCCAGT ACAACGAGAA AACGACGCTG GCCAACCCCG AGGTACTGGC CGACTTTGCT
GCCAACAAGG TGACCTTGTT GCGTGCCGAC TGGACCCAGC GCGACCCCGC CATCAGCGCC
GCGCTGGCGC AACTCGGCCG CAGCGGGGTG CCGGTCTATG TGCTGTACCA AGATGGCCGT
GCGCCCGTGG TGCTGTCTGA AATTCTGAGT GTGCAAGAAG TCCGCTCGAT GCTGGCCAAG
CTGAAGAGTT CATGA
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| Protein sequence | MNCLKLPHRL IFATLFVAFC TITTGARGQN IPQSVVNTEQ VRAELMVQAP DGADAGKSVW
VGLQLTHLPE WHTYWKNPGD SGLPTTLQWT LPAGVTAGEI AWPLPKKIPL GNLTNYGYEG
TVLLPVPLSI SPAFKPSPQS SGLEIKLKAT WLVCRLECVP QDGEFVLNVP VRGSTALNSA
AFTASLKAQP AALEGDSRVA VDGKQLKLTV VGLPPTLRGK QLEFFPETPE LIDPAATWSQ
QWTKNGQGDV WTASVPLSGL RSESPALIPL VLVADVNGQR QGFRAQAQVL GNWPPVAGVA
GSSPPGLAPA LASTTAPTGP QVSFGLWAAL LGALLGGMIL NLMPCVFPVL AIKVMSFTRH
AHDRRGHRIS GLAYSAGVVL SFLALGALLI GLRSAGEQLG WGFQLQSPAV VAALAVLFTV
MGLNLAGLFE FGRFLPNAVL TLEAKNPAVN AFLSGVLAVA IASPCTAPFM GASLGLALGL
PPLQALLIFM TLGIGMALPY LAASLTPAVA RWLPRPGAWM DTFRRAMAFP MFATVVWLVW
VLGQQSGIDG AAALLALLLS LSLVLWSLTL TGRSRVVIAT ISIATLTLLT GAIGQNVIKM
AGASRVASDS RWQLWAPGRV EQVLATGAPV FVDFSAAWCV TCQYNEKTTL ANPEVLADFA
ANKVTLLRAD WTQRDPAISA ALAQLGRSGV PVYVLYQDGR APVVLSEILS VQEVRSMLAK
LKSS
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