| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0684 |
|---|
| Symbol | |
|---|
| ID | 3963830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 719272 |
|---|
| End bp | 720585 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637915515 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_521966 |
|---|
| Protein GI | 89899495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGATCAC ATCCAAGCGG GCGAGCCAGC ACCGCAACAA CGACCGGAAT CCACTTGAAG
CGAATCCTGA TGATTGCCTA CCACTTCCCG CCGCTGGCGG GCAGTAGTGG CATACAACGA
ACGTTGCGGT TTGTACAGCA TTTGCCGTCA CTGGGATGGC AACCGCTGGT GCTTAGCGCC
CACCCCAGCG CTTATGAAAA AACAAGTGAC GATCTGCTGG CCGACGTGCC CGCCGGCACC
GTCGTGCGCC GGGCCTTTGC ACTGGACACC GCCCGTCACC TGCAAATTGC GGGACGCTAT
CTGGGCTGGA TGGCGCGACC CGACCGCTGG ATCAGCTGGA AGTTTGACGC CATCCGCCAG
GGGCTCAAGC TGATTGAAGA GTTCAAGCCG GATGTGATCT GGTCCACCTA CCCCATCGCC
ACAGCACATG TGATTGCCTC GGCACTGCAC CGTAAGACAG GTATTCCGTG GGTTGCGGAT
TTCCGCGATC CCATGGCGCA AGAAGGCTAC CCGGCCGACC CGCGCACTTG GCAGCGCTAC
TTGGCGATAG AGGCTGACGC AGCAGCGCTG GCGCGCTACT GCGTGTTCAC CACGCCTGGT
GCGGCACGGG TCTACCAGCA GCGCTACCCG GCCGCGGCCG GCCGCATGAT GGTGCTGGAA
AACGGCTATG ACGAAGAAAG CTTTGCGTCT GCTGCGCTGC AGCCCCAGGT ATCGTCAAGC
GAAGGCAGTA CAACGTCGTC TACCCCACGC CCGCTGGTCA TGCTGCACAG CGGCATTGTT
TACCCGTCCG AGCGCGATCC AACCCAATTG TTTGTGGCGC TTGGCCGCTT GCAAAAAGCG
GGTGCGCTGG GCCCGAATGA GTTGCATATC CGCTTTCGCG CATCAGTGCA CGATGACTTG
TTGCACAGTC TGGCACTGGC TTATGGTGCG CAGGACTACA TCGAGCTGTG CCCAGCAACT
CCATACCGCG AGGCGCTGGC AGAAATGATG GCCGTCGATG CCCTGCTGGT CATGCAGGCC
AGCAACTGCA ATGCGCAGAT TCCGGCCAAG ATATACGAGT ACCTGCGTGC TGGGAAACCC
ATTCTGGGGC TGACTGACCC CGACGGTGAC ACGGCTGGTG TGCTACGCGG AGCGGGGCTC
AATGACATGG CGCGCCTTGA TTCGGCCGAT GAGATTGCCA GGGTGCTGCC GGTGTTTGCG
GCTGCAGTGC GGGCAGATAA AGCTAAATTA CCGGACCCTG CCGCCGTGCA ACTCGCGTCG
CGCCGAGGGC GTTCTGAATT ACTGGTGCGA TTTTTGAACG ATGTAGACAA GTAG
|
|---|
| Protein sequence | MRSHPSGRAS TATTTGIHLK RILMIAYHFP PLAGSSGIQR TLRFVQHLPS LGWQPLVLSA
HPSAYEKTSD DLLADVPAGT VVRRAFALDT ARHLQIAGRY LGWMARPDRW ISWKFDAIRQ
GLKLIEEFKP DVIWSTYPIA TAHVIASALH RKTGIPWVAD FRDPMAQEGY PADPRTWQRY
LAIEADAAAL ARYCVFTTPG AARVYQQRYP AAAGRMMVLE NGYDEESFAS AALQPQVSSS
EGSTTSSTPR PLVMLHSGIV YPSERDPTQL FVALGRLQKA GALGPNELHI RFRASVHDDL
LHSLALAYGA QDYIELCPAT PYREALAEMM AVDALLVMQA SNCNAQIPAK IYEYLRAGKP
ILGLTDPDGD TAGVLRGAGL NDMARLDSAD EIARVLPVFA AAVRADKAKL PDPAAVQLAS
RRGRSELLVR FLNDVDK
|
|---|
| |