Gene Rfer_0682 details

Gene Information

• Locus tag: Rfer_0682
• ID: 3963828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 713903
• End bp: 717274
• Gene Length: 3372 bp
• Protein Length: 1123 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637915513
• Product: putative Ig
• Protein accession: YP_521964
• Protein GI: 89899493

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.929764
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT CCTCCCCAAT GTCTTCGTGT TGTCAGGCTG CATTTCAAAA AATGAGGTGC 
ATAGGCTATT GGCTTACGCT TGCAGCGTTG GCTGGTTTGC CGGCCTGCGG TGGAGGCACC 
GATACCCCAG ATAAGTCTTC ATCGGCTCCG TCCAGCCTGC AGCAGACTCT GGTCAATTTG 
GTGATTGACA CGACAAGCCC GGGACTCGTG ACCGAGGGCA GTTTTGATCA GGTGCCCGGC 
TACTTGGCAA AGAGCCCGCA GGTCTTGCGC AGCAATGGTG CAGCGGGCGC GCGCTTTGCG 
TTGCAGGTGC CGCAGGCAGG TCAGTATGAA GTGTTCGTCT GGTGGCCGCA GAATCTGGCG 
GATGCCGGTA TTGCAGATAT CACGGTCGAA TACCACGGCG GCAAAAACAC AATTTCCCGG 
AGCCAGCGCA GCGGTGGCGG CTCATGGCAA TCGGTTGGCA CATATCCGTT TGATCCGTCG 
ATTCCCGGGG CTGTGGTGCT GCGGAACGCA AGCGGTGCGC CCTTGTACGT GGATGCAACG 
CGCCTGCAAT ACGTCGGGCG ACTGGCCCCC GTTATGGTGT TTGCGTTCGA CAAGTTGCCG 
GTCGGCCTGA AGGATGAGCC GTATACCGCG CAACTCGGTA TGGCGGGTGG TATGCCGCCT 
TACAGCTATG CGATTGTGGA TGGCGACTTA CCTCCGGGTT TGGCACTGGA TGGGGCCACT 
GGCGACATCA CCGGCCGCCC GGCGCAGGCG GGCGAGTTCA CCTTCACCGT GCGCTCGCAG 
GATGCCACGC GTCAGTTGGC GTCACAGACG ATGACCCTCT ACATCGGAGA GTCGGCGGGC 
ACCGCCAGTA CTGTGCAGGG TTTGTTCCCA CGTCCGCTTG AGGTCCCCAG TGCGCGCCGC 
CAATCGGCTG TCACGCCGTC CGGCGCGCCG GACGTTTCCA ACTTGCTCGC CATTGTGGCC 
GGCATGGCCG AAGGGGAATG GCGTCGGGTC AACCTGAACG CTTTCTCATC CGTCTGGACC 
CCCGCCGACC TGCGCCCTTT GTTGTCCAAA AGCAACCCTG ATCCCTCCCG CCTGATTCTC 
GCGTGGAGCA GTTTTGCCTG GGATTCCAAC CGTGCTGCGC TGCTACTTTA TGGTGGCGGC 
CATGCCAATT ACCGTGGCAA CGATGTCTAC TTGTGGCGCG CCAGCACACA GAGGTGGGAG 
CGTGCATCGC TCCCAAGCGA GATGGTCCAA ACCCCTCTGG GCTACTGGAA TGCGATTGAC 
GGTGTCGACA AAGCGCCGGC GTCCGCTCAC ACTTATGACA ACACCATCTT CCTTCCGATT 
CTGGATCGCA TGCTGGTGCT GGGCGGCGCC GCCGACCCCA ATGGCGGACC TTACATTACC 
CAGGACACCG CAACAACAGC GCGCATCACC GGGCCCTACC TTTTTGACCC AAGCCGCGCG 
AACGCCGACA GGGTAGGCGG CAGCACCGGG TCGCATGTGA AACGCGTGGC ACCGTACCCC 
GAAATTGTGG GCGGCAATAT GTGGTCAAAC CGCGAGTCGT GGCTGAATGC GTCGGCGTCA 
TCAGCACCTC CTGTCGAAAC CCTGTCCGAC GGGTGCACAG GCTATGCCGT GGAGGACGGC 
CGTGATGTGG TCTATTTGCG CACGGCCAGC CGCCTGTACC GCTATGAAAT AAACGACTTG 
GCCAATCCCG CCGCCGATGT CTGGAAGCAG GTCAATAGGT ATTACTACGG CGGCTCCGGT 
GGACAGAGCA CCTGCGGCTA CGACCCGCTG CGCAAGATAT TCCTGTCGAC GCATCTGAAG 
ACGCCATTCA TCTTTTGGGA CCTGTCAAAT TCCAATCCGG GCAACCTGGA CAAAATGATC 
ACACCTGTCG ACCCAACTGG CGAATTTCCG ACACTGCTGT CAAGCGGTGA GATCCAGATG 
CGCAATTGTG GTCTGGAGTT TGACCCCGTT CGCAAAGATT TCAAGCTCTG GTGTGGTGAT 
GGTCGCGTCT GGGCCGTGAC GCCACCGCCA ACGCCGGTTG CCACGGGCTG GACTATTGTC 
AAGGCTTCAT TGCCGCCAAG CGCAGTGCCG ACCGAAAGTC TTGGCACCGG CATTTTGGGC 
AAATGGAAGT ACGTGCCAAA CCTGGATGTC TTCATGGGCC TGGCCGATGC GGTGCAGGGC 
AATATCTGGG TTTATAAGCC GCACGGCTGG GTGAACCCCG CCGGAGGCAG CAACCTGCCA 
CCGTCAGTGT CGATCACCGC ACCCGTTAAT GGCGCAAGCG TCACAGTGGG GGCGAGCATC 
GCGGTGTCGG CCACTGCGAC TGACGTCGAC GGCAGTGTTG CCAAGGTCGA GTTCTTCGCC 
GACAGCTACA AGATCGGTGA AAGTCTGGCC GCGCCCTACG GCATGGTGTG GTCTGGCGCC 
ACAGTGGGCG CGCATACGCT CACGGCAGTG GCCACCGACG ATGCGGGGGG CACCAAGACC 
TCGGCCGAGG TTACAGTCAC GGTGACTCCG GTGGCCCCGC TCAACAATCC TCCTACCGTC 
AACCTTGTAC GCCCCACCCC TGGCGCCATC TTTCCTTTTG GCACGCCGGT CACCCTTGAA 
GCTTCGGCCG CAGACAGCGA CGGCGCCGTG ATACGCGTCG AGTTTTACGC CAACGCCATC 
AAACTGGGTG AATCTACCGT CGCGCCGTTC ACGCTGGTGT GGGCCTCGCC CCCCTTGGGC 
ACCAGTGCAC TCTACGCAGT TGCCACCGAC GATCAAGGCG CCAGCGCCAC CTCGGTGGTG 
GTGTCCATGA CCGTCTCGCC TGCCTCGGGC GGCGCTGGGT CGATCACCCT GCAACGCGGC 
GCGAGTCCGT TCACCGTCGC CGACACCTAT CTGTCTGCGT ATCACTCGAC GTTGAACTTC 
GGAGCAGCGA GCAATCTCCG GGATCAGTTC AGCAACTACT CGTCGCTGAT GCGCTTTGCG 
ATCTTCCAGT CTGAAGGCGG CCCTGTTCCG AACGGCACGA ACATTACCTC AGCGACCTTG 
TCGTTGTACA AGTACTCGTC TTACAACATG GTTTATTCCG TGCACCGCGT GTTGTTGGAC 
TGGTCGGAGA GCAGCGCCAC CTGGAATCTG CGCCAGCCGG GGCTGGCCTG GTCCACAGTA 
GGTGCCAACG GTCTGGGTAC GGATATTTCT GCTACGCCGG ATGCTTCTGC ATCTACAGAC 
TTCAACCCGG GTTGGATCAA CTTCGACGTG ACTGCAAGCG TGCAGGCAAT GAGCCTGGCC 
CCGACGCTTG CCAACTACGG CTGGCGTCTC AAGGGCGTGA GTGGCTACAC CAGCGGGCTC 
AAGTGGATCT ACTCAAGTGA ATTCTCTGGC ACGCCGACAC TGCGCCCGAA ACTGGTAATC 
ACCTACAACT GA 

 

Protein sequence

MNQSSPMSSC CQAAFQKMRC IGYWLTLAAL AGLPACGGGT DTPDKSSSAP SSLQQTLVNL 
VIDTTSPGLV TEGSFDQVPG YLAKSPQVLR SNGAAGARFA LQVPQAGQYE VFVWWPQNLA 
DAGIADITVE YHGGKNTISR SQRSGGGSWQ SVGTYPFDPS IPGAVVLRNA SGAPLYVDAT 
RLQYVGRLAP VMVFAFDKLP VGLKDEPYTA QLGMAGGMPP YSYAIVDGDL PPGLALDGAT 
GDITGRPAQA GEFTFTVRSQ DATRQLASQT MTLYIGESAG TASTVQGLFP RPLEVPSARR 
QSAVTPSGAP DVSNLLAIVA GMAEGEWRRV NLNAFSSVWT PADLRPLLSK SNPDPSRLIL 
AWSSFAWDSN RAALLLYGGG HANYRGNDVY LWRASTQRWE RASLPSEMVQ TPLGYWNAID 
GVDKAPASAH TYDNTIFLPI LDRMLVLGGA ADPNGGPYIT QDTATTARIT GPYLFDPSRA 
NADRVGGSTG SHVKRVAPYP EIVGGNMWSN RESWLNASAS SAPPVETLSD GCTGYAVEDG 
RDVVYLRTAS RLYRYEINDL ANPAADVWKQ VNRYYYGGSG GQSTCGYDPL RKIFLSTHLK 
TPFIFWDLSN SNPGNLDKMI TPVDPTGEFP TLLSSGEIQM RNCGLEFDPV RKDFKLWCGD 
GRVWAVTPPP TPVATGWTIV KASLPPSAVP TESLGTGILG KWKYVPNLDV FMGLADAVQG 
NIWVYKPHGW VNPAGGSNLP PSVSITAPVN GASVTVGASI AVSATATDVD GSVAKVEFFA 
DSYKIGESLA APYGMVWSGA TVGAHTLTAV ATDDAGGTKT SAEVTVTVTP VAPLNNPPTV 
NLVRPTPGAI FPFGTPVTLE ASAADSDGAV IRVEFYANAI KLGESTVAPF TLVWASPPLG 
TSALYAVATD DQGASATSVV VSMTVSPASG GAGSITLQRG ASPFTVADTY LSAYHSTLNF 
GAASNLRDQF SNYSSLMRFA IFQSEGGPVP NGTNITSATL SLYKYSSYNM VYSVHRVLLD 
WSESSATWNL RQPGLAWSTV GANGLGTDIS ATPDASASTD FNPGWINFDV TASVQAMSLA 
PTLANYGWRL KGVSGYTSGL KWIYSSEFSG TPTLRPKLVI TYN