| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0676 |
|---|
| Symbol | |
|---|
| ID | 3963861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 704862 |
|---|
| End bp | 706241 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637915507 |
|---|
| Product | putative CapK protein |
|---|
| Protein accession | YP_521958 |
|---|
| Protein GI | 89899487 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0499803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCT ATACCGCACT GTGTTCGAAC TTTTTTTTCC CGCTCCACGA ACGCCTCAAA
GGCCATGACT CCGTGGCACT GCGAAAACAC CTGGAAGAAA GTCAGTGGTG GCCCGCTGAA
CAACTCGAGA CTTACCGTGC CAAGAGATTG CAGCAGTTCC TGGTCGATAT CGGACAGCGT
GTGCCCTACT ACCAACAGTT GTTCAAACAA CTCAATTTCG TCCCGAACAC GGTCCGCTCG
ACCGCCGCAT TGCAACTGTT GCCATTGCTC GCCAAATCAG ACATCCGGAA AAACGTCGAC
AAGCTGAAGG CCGAAGGCCA TGGCCCATTG ACACGTTACA ACACCGGTGG CTCTTCCGGA
GAACCCCTCA TCTTTTACAT GGGCAAGGGA CGCAAAAGCC ACGACGTTGC TGCCAAATGG
CGCGCCACCC GCTGGTGGGG CGTTGATATT GGCGACCCTG AACTGGTCGT GTGGGGTAGC
CCGATGGAGA TTGGTGCACA AGACCGCGTC AGGCGCCTGC GTGATGCGCT GCTGCGAAGT
CGCTTGTTGC CGGCTTTCGA AATGTCGCCT CAAAATTTGG ACCGGTTTGT GGAGACGATC
CGCGTTACTC GTCCTACTAT GCTGTTTGGC TATCCATCGA GTCTTTCTCT CATTGCACAG
CACGCGCGGC ACAAAAGCGT TGCCATGAAT AGTCTGGGGA TCAAGGTTGC ATTCGTCACC
TCCGAGAAGC TCTATGAAGA GCAACGAGCC ATCATCAGTG AGGTATTTGC TTGCCCGGTG
GCTAACGGCT ATGGCGCGCG CGACGCAGGG TTCATCGCAC ACCAGTGCCC TGAGGGTAGT
TTGCATATCA GCGCCGAAGA CATCATTGTG GAAACAGTGC GCCCAGACGG CTCTCCTGCG
GCCGCAGGCG AGGCTGGCGA AATTGTCGTC ACACACATGG CAACGGTGGA CTTTCCTTTC
GTGCGCTATC GCACCGGTGA TATTGGGGTC TTGGACGATA AGCCATGCGC GTGTGGCCGT
GGCTTGCCCG TGCTGAAAGA AGTGCAGGGG CGCACGACCG ACTTCGTCGT CGCGCGAGAC
GGTACGATCA TGCACGGTCT GGCATTGATC TACACAGTGC GGGATCTGCC GGGCGTTGAA
CGTTTCAAAA TTGAGCAGTT GTCGCTGGAT CAAACAATCG TCAAGGTCGT GGCTGGGCCA
GCCTTTGGCG CAGCAGCAGA AGCGCGCATC ATCCGCGACT TCAAAGCCCG GCTGGGTGAA
GCCGTTGATA TCCGCGTCGA AAGGGTGCGT GATATTGCCA ATGAATCCTC AGGCAAGTTT
CGCTATGTTG TGAGTCAGGT CAGGGTTTTT GGGAATGGCA AGGAGGTCAA AAGTGCGTGA
|
|---|
| Protein sequence | MSLYTALCSN FFFPLHERLK GHDSVALRKH LEESQWWPAE QLETYRAKRL QQFLVDIGQR
VPYYQQLFKQ LNFVPNTVRS TAALQLLPLL AKSDIRKNVD KLKAEGHGPL TRYNTGGSSG
EPLIFYMGKG RKSHDVAAKW RATRWWGVDI GDPELVVWGS PMEIGAQDRV RRLRDALLRS
RLLPAFEMSP QNLDRFVETI RVTRPTMLFG YPSSLSLIAQ HARHKSVAMN SLGIKVAFVT
SEKLYEEQRA IISEVFACPV ANGYGARDAG FIAHQCPEGS LHISAEDIIV ETVRPDGSPA
AAGEAGEIVV THMATVDFPF VRYRTGDIGV LDDKPCACGR GLPVLKEVQG RTTDFVVARD
GTIMHGLALI YTVRDLPGVE RFKIEQLSLD QTIVKVVAGP AFGAAAEARI IRDFKARLGE
AVDIRVERVR DIANESSGKF RYVVSQVRVF GNGKEVKSA
|
|---|
| |