| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0673 |
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| Symbol | |
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| ID | 3963858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 701371 |
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| End bp | 702687 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915504 |
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| Product | GDP-mannose 6-dehydrogenase |
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| Protein accession | YP_521955 |
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| Protein GI | 89899484 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0577586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA GCATTTTTGG ACTGGGCTAT GTGGGGGCGG TGTCGCTGGC CTGTTTGTCA
CGCGACGGCC ACGACGTGAT TGGGGTTGAC ATCGACCGCA CAAAACTTGA CTTGATCATG
GCGGGCAAGA CACCGGTGGT GGAAGAGGGC ATGGTCGATC TCATGGCGCG TGTGGCGGCC
AGTGGCAAGG TCACAGTGAC CACCGATGCG CAAGCCGCGG TGCTTGACAG CGAAATATCT
CTGGTCTGCG TTGGCACGCC ATCGGCGGCC AATGGCAGTC AGGATCAGGG CGCCATTCTT
CGCCTGGCTG AAGAAATTGG CCGGGCCATT GCTGAAAAGC AGGAGCCGCA TGTGGTCGTT
TTTCGTTCAA CACTGGTACC GGGTACGGTG GAGGATGTCT TGCGCCCGAT CATTGAAGCG
CAGTCCGGCA AGAAAGAGGG AGCAGATTTT TTTCTTTGTT TTCAGCCCGA ATTCTTGCGG
GAGGGCTCCT CCATTCGTGA TTACGACAAG CCTCCGTTTA CCGTCGTAGG CGCCAACCAC
GCCTATCCGG TCGAGCGTCT ACGAGAGCTG TTTGGCCAGT TGCCGTGTAA ATTTCTAGAA
ACCACGGTGC GCTCCGCCGA GATGATGAAG TACTGCTGCA ACAACTTCCA CGCCCTCAAG
ATCACCTTTG CCAACGAAAC CGCCCGCCTT TGCGATGCCC TTGGTGTGGA CGCGTTCGAG
GTGATGGATC TGATGTGCCA GGACACCCAT CTGAATATTT CGCGCGCTTA CCTGAAACCT
GGTTTTGCCT TCGGTGGTTC CTGCCTGCCC AAGGATTTGC GGGCCACCAC CTATCTCGCC
AAGATACATG ACGTCGAGAT TCCCATGCTG GCGGGCATCA TGCCGTCTAA CCGCGATCAT
CTTGACCTGG CACTGCAAAA ACTGTTGGCC ACTGGCAAGC GCAAGATCGG ATTTGTCGGT
CTTTCATTCA AGACCGGGAC CGACGACCTG CGCGAGAGCC CGCTGGTCAG CCTGGCCGAA
CAATTGATTG GCAAGGGCAT GCAGCTTTCC ATTTATGACC CCGAGGTTCG TCTGGCCCAA
CTGCTGGGTG CCAATCGCAG TTTTATTGAG AAACATCTCC CCCATATTGG GCAGATGTTG
CGCGGCGAAA TAGAGGGCGT TATTGACGAG TCCGAGGTGT TGGTGGTTGG GCTCGCTGAT
CAGGCGGTTT TCGACACCCT GGCAAGTCGC TGTCGGCCCG ACCAGGTCGT GCTTGACCTG
GTTAACCTGC CCAACCGTGC AGTCATTCGG GCCAAGGTGG AAGGCCTATG CTGGTAG
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| Protein sequence | MKISIFGLGY VGAVSLACLS RDGHDVIGVD IDRTKLDLIM AGKTPVVEEG MVDLMARVAA
SGKVTVTTDA QAAVLDSEIS LVCVGTPSAA NGSQDQGAIL RLAEEIGRAI AEKQEPHVVV
FRSTLVPGTV EDVLRPIIEA QSGKKEGADF FLCFQPEFLR EGSSIRDYDK PPFTVVGANH
AYPVERLREL FGQLPCKFLE TTVRSAEMMK YCCNNFHALK ITFANETARL CDALGVDAFE
VMDLMCQDTH LNISRAYLKP GFAFGGSCLP KDLRATTYLA KIHDVEIPML AGIMPSNRDH
LDLALQKLLA TGKRKIGFVG LSFKTGTDDL RESPLVSLAE QLIGKGMQLS IYDPEVRLAQ
LLGANRSFIE KHLPHIGQML RGEIEGVIDE SEVLVVGLAD QAVFDTLASR CRPDQVVLDL
VNLPNRAVIR AKVEGLCW
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