Gene Rfer_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0601 
Symbol 
ID3960119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp627074 
End bp627520 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID637915431 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_521883 
Protein GI89899412 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG GCATTCTTAT CATTGCTCAT GCGCCACTGG CCAGTGCGTT GCGCCAGTGC 
GTGCTGCATG TATTCCCGGA TGCCGAGGCG GCCGTCGCGA CGTTTGACGT GCAGCCCAAT 
ACGCCACCCG AAGAAACGCT GGCGGGTGCC AGGCAGGCCC TGGCCTTGCT GAATGTGCCG 
CAGACACTGG TGTTGGCCGA CGTGTTTGGG GCCACCCCCT GTAACGTGGC GCAAAGGCTG 
GTCGATGGCG TGAACTCAAA ATTAGTTGCC GGGGTCAACC TGCCGATGCT GCTGCGCACC 
GTCACCTACC GCGGTGAAAC CCTGGATGCC ATGGTGGCGC GGGCTCTGGC GGGTGGCACG 
CAGGGCGTCA TGCCGGTGGC GACGACGGCG CCGCAGAATC AATTGAGGAA AAAAAGTGAT 
CAAAGCAAGC ACGACCATCA GCAATAA
 
Protein sequence
MNNGILIIAH APLASALRQC VLHVFPDAEA AVATFDVQPN TPPEETLAGA RQALALLNVP 
QTLVLADVFG ATPCNVAQRL VDGVNSKLVA GVNLPMLLRT VTYRGETLDA MVARALAGGT 
QGVMPVATTA PQNQLRKKSD QSKHDHQQ