| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0545 |
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| Symbol | |
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| ID | 3960733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 569083 |
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| End bp | 570768 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915375 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_521827 |
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| Protein GI | 89899356 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA TCTGGCTCAA GAGCTACCCC CCCGGTGTCC CGCATGACGT CAACCCGGAA
CAATACCAAT CATTGACACA GCTGCTGGAA GAATCCTTCC GCAAGAACGC CAGCAGCCGC
TTCGCCGTGT GCATGGAGAG CTGGATGACC TATGGCCAGC TTGATCAGCT CTCAAGCGCG
CTGGGCGCCT GGCTGCACAG CCTGGGCCTG GCGCCGGACG CGCGGGTTGC CATCATGCTG
CCCAATATCC CGCAGTTTCC GGTGACGATG GCCGGCGTCT TGCGCGGCGG CTACACCTGT
GTCAACGTGA ACCCGCTGTA CACCGCGCGC GAGTTGCAGC ACCAGTTGAA CGACTCCGGC
GCGAGCGTGA TTGTGGTGCT GGAGAACTTT GTCGCCACCC TGGCCGAAGT GATTGACCAG
ACCCCGATCC AGCATGTGGT GGTGGCTTCC ATGGGCGACT TGCTGGGCTT TTGGTACGGC
CAGTGGATCA CGTTTGCCGT GCGCCACCTC GCCAAAATGG TACCCCCTTA CAAACTGACG
CTGACCGAGG GCCGCACCGC CACCTCGTTC AAGCAGGCCA TCGCCAAGGG CGCCGCCCTG
CCCTTCAGGT CGGCGCCGAG CACGCTCGAT TCCATCGCAT TCTTGCAGTA CACCGGCGGC
ACCACGGGCC TGAGCAAAGG CGCCGTGCTG ACGCACCGCA ACATCGTGGC GGCGGTCTTG
CAGGCCGAGG CCTGGTTCAA CCCGGCGCTC TCGCGTATCG GCGACGTCCG CCACGTCAAC
AGCATTGCCG CGCTGCCGCT GTACCACATC TTTGCGCTGA CGCTGTCGCT GCTGGCCATC
CGCTGGGGGG CGCAGCTGAC CCTGATTCCG AACCCGCGCG ATTTTGGCGG CTTCATCGAG
ACGCTCAAAA AGCGCCCGTT CCATTTGTTG CCGGGTGTCA ACACCTTGTT CAACGCCCTG
CTGGCGCAGC CGCAATTCAA GACGGTGGAT TTTTCCAGTC TCTGCGCGAC GCAAGCGGGC
GGCATGGCGG CTTCAGAGGG CACCGCCCAG CGCTGGCTGG AGACCACCGG TTGCCCGATG
GTCGAAGGCT GGGGCATGAG CGAGACCTGC GCCATTGGCA CCAACAACCC GGTGCTGGCT
CGGGAGTTTT CGGGCACCAT CGGCCTGCCG CTGCCCGGCA TTGACATCGC CATCAAGGAT
GACGAGGGCC AGTCTCTGGC TCAAGGGTCG CCCGGTGAAA TCTGCATCCG GGGCCCGAAT
GTCATGACCG GCTACTACCG CCAGCCCGAA GAGAACCGGC GCGCCTTCAC CACCGACGGC
TTCCTGCGCA CCGGTGATGT CGGCATCATG GACGAGCGCG GTTACACCAA AATTGTGGAC
CGCAAGAAAG ACATGATCCT GGTCAGCGGC TTCAACGTCT TCCCGAGTGA ACTCGAAAAT
GTGATTTCAC TGTGCGATGG CGTGCTGGAG TGCGCCGTCA TCGGGGTGCC CGACGAGAAG
CAAGGCGAAG CCATCAAGGT CTTTGTCGTC AGGGACAACC CGCTGCTGGC CGAGGACGAC
GTGGCGCGCT ATTGCCAGCA GAATCTGACC GGCTATAAAC ACCCTAAGTA CATTGAATTC
CGTGACGAAC TGCCCAAATC GAATGTCGGC AAGATACTTC GGCGTGAGTT GCGCGTCGGC
AAATAG
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| Protein sequence | MEKIWLKSYP PGVPHDVNPE QYQSLTQLLE ESFRKNASSR FAVCMESWMT YGQLDQLSSA
LGAWLHSLGL APDARVAIML PNIPQFPVTM AGVLRGGYTC VNVNPLYTAR ELQHQLNDSG
ASVIVVLENF VATLAEVIDQ TPIQHVVVAS MGDLLGFWYG QWITFAVRHL AKMVPPYKLT
LTEGRTATSF KQAIAKGAAL PFRSAPSTLD SIAFLQYTGG TTGLSKGAVL THRNIVAAVL
QAEAWFNPAL SRIGDVRHVN SIAALPLYHI FALTLSLLAI RWGAQLTLIP NPRDFGGFIE
TLKKRPFHLL PGVNTLFNAL LAQPQFKTVD FSSLCATQAG GMAASEGTAQ RWLETTGCPM
VEGWGMSETC AIGTNNPVLA REFSGTIGLP LPGIDIAIKD DEGQSLAQGS PGEICIRGPN
VMTGYYRQPE ENRRAFTTDG FLRTGDVGIM DERGYTKIVD RKKDMILVSG FNVFPSELEN
VISLCDGVLE CAVIGVPDEK QGEAIKVFVV RDNPLLAEDD VARYCQQNLT GYKHPKYIEF
RDELPKSNVG KILRRELRVG K
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