Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0544 |
Symbol | |
ID | 3960732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 567813 |
End bp | 569048 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915374 |
Product | general secretion pathway protein F |
Protein accession | YP_521826 |
Protein GI | 89899355 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTTT ATTCTTTTGA AGCTCTGACC GCCGACGGCG AAACCCGCAA GGGTGTGATC GAGGCCGACT CGGCCAAGGG CGCGCGCAGC CTGCTGCGCG GCCAGGCCAT GGTGCCGATC AAGGTGGAGT CGGTCGGGGC GCAGGCGGCG GGGCAGGACG GGGCCGGTGG CGCCGGCGCA GGCCGCAGTC TGAGGCGGCG GGTTTTCAGC GCCACGGGAC TGGCCATCTG GACGCGCCAA CTGGCCGGCC TGGTGTCCTC GGGCCTGCCG CTGGAGCGGG CGCTGACCTC GCTGTCGGAT GAGGCCGAGC GCGACAATGA GCACCACCTG GTGGCGCTGT TGCGCGCTGA AGTCAACGGC GGCGCGACCT TTGCCAAGGC CTTGTCGCAG CATCCGCGTG AGTTCACCCC CATTTTTATT GCCGTTATCG GCGCCGGTGA GCAAAGCGGC AACCTCGGCC TGGTGCTGGA GCGCCTGGCC GACGACCTGG AAGAGCAGCA GGCGCTCAAG GCGAAGCTGA TAGGCGCGGC GCTGTACCCG GCCATCGTGT CGCTGGTGGC GGTTGTCATT GTGCTGTTCT TGGTGACCTA TGTGGTGCCG CAGGTGGCCC ATGTGTTTGC GGGCAGCAAG CGCGCCCTGC CGCTGCTGAC GGTGATCATG ATCGGCACCA GCGCCTTTGT GCGCAGTTAT GGCTGGCTGA TGCTGGTTGC TATTATTTTC GGAGTTATCG GCGCACGCCT GGCGCTGGCT AACGCCTTGT TTCGTGAAAA ATTTGACGCC GCCTGGTTGA ATCTGCCGAT TCTGGGCAAG CTCTCACGCA GTTACAACAC CGCGCGCTTT GCCAGCACGC TGGCGATGCT GGCCGCCGCC GGGGTGCCGA TTCTCAAAGC CCTGCAGGCG GCCGCTGAAA CGCTCTCCAA CCGCGCCATG CGCACCGACG CGCTCGATGC CTTGGTGCTG GTGCGCGAAG GTGCGCCGCT GGCCTCGGCG CTGGCGCAAA AAAAGCGTTT TCCGGGGCTG CTGGCCATGT TCGCCCGCCT GGGTGAGCAA ACCGGCCAGT TGCCCACCAT GCTGCAGCGC GCGGCCAAGC AACTCAGTGT CGAGGTGCAG CGCCGCGCCA TGCAACTGGC CACCATTCTG GAGCCGCTGC TGATTGTGGT CATGGGCGTG GTGGTGATGT TGATCGTGCT GGCGGTGCTG ATGCCGATCA TTCAACTCAA TCAACTGGTG AAATGA
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Protein sequence | MPVYSFEALT ADGETRKGVI EADSAKGARS LLRGQAMVPI KVESVGAQAA GQDGAGGAGA GRSLRRRVFS ATGLAIWTRQ LAGLVSSGLP LERALTSLSD EAERDNEHHL VALLRAEVNG GATFAKALSQ HPREFTPIFI AVIGAGEQSG NLGLVLERLA DDLEEQQALK AKLIGAALYP AIVSLVAVVI VLFLVTYVVP QVAHVFAGSK RALPLLTVIM IGTSAFVRSY GWLMLVAIIF GVIGARLALA NALFREKFDA AWLNLPILGK LSRSYNTARF ASTLAMLAAA GVPILKALQA AAETLSNRAM RTDALDALVL VREGAPLASA LAQKKRFPGL LAMFARLGEQ TGQLPTMLQR AAKQLSVEVQ RRAMQLATIL EPLLIVVMGV VVMLIVLAVL MPIIQLNQLV K
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