| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0539 |
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| Symbol | |
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| ID | 3963878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 561627 |
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| End bp | 562886 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637915369 |
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| Product | hypothetical protein |
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| Protein accession | YP_521821 |
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| Protein GI | 89899350 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG ACACGCACCA ACCAGCACCC ATGACCACCC TGATCGTTAC CCTACCTGCC
GAGCCGCTTG ACGCGGCTGC CTTGTACGAC TACGTGCTGA CCCGTGATGG CAGCACGGTG
GCCGAGCAGT CGCGCGCTCC GCTGGCGCTG TTGCCCCTGG TGGGCAAAGC CGACTGCGAG
GTGGTGGCCC TGGTGAGCGC GCAGCGTCTG TCCTGGCACC AGGTGCAGTT GCCCAAGGGC
ACGTTGGGGC GGCGATTGTT TCAGGACGGT GGCGCCTTGC GCGTACGCGC GGTGCTTGAT
GGCCTGCTCG AAGACCGCCT GCTCGACGAC ACCGAGCAAC TGCATTTTGC GCTGGAGCCC
CAGCCGCCCA CCGATGCGCC GGTGTGGGTG GCGGTGTGCG AGCGAGCCTG GTTGCGCGCG
GCTTTGCAGG TGCTGGAGCA ATCCGGGCGG GCGGTCAGTC GCATCGTGCC CGAGTTCACG
CCGCAGGCGC TCACGAACAC GCTTTACGTG ACGGGTGAGG CCGACGCGGC CTATTTGGTG
GGCGCCGCCG AAGGCAGCGT CGCCGTGTTG CCCCTGTCCC GGGAGGCGAT GGCGCTGCTC
GCTGGATCGG AAGAAAAAAA TGTGGTGGCC GAGCCCGCCG TGGTGGCATC GGCTGAAGCG
CTGTTCCAGC GCCCGGTCAC GCTGCAACAA AGTGCCCTGC GCCAGTTGCA GGCCGCGCAG
TCGGCCTGGG ATCTGGCCCA GTTTGACCTG GTGACGTCCC AGAGCGCCAG AACCTGGAAG
CGTTGGGCTG GTGCCGCGCG CGGCCTGCTC AGCGCGCCGC GCTGGCGTGC CGCCCGGCTG
GCCGTGCTGG CGCTATTGAT CATTAATCTG GCGGGCCTGA ACGCCTGGGC CTGGAAGGAA
AAGTCCTTGC TCAACAGCCA GCGCCAGGCC ATTCAGGCCG TGCTGACCAC CACATTTCCC
CAGGTGCGCG TGGTGGTCGA TGCGCCGACC CAGATGGCGC GTGAGGTGGC GACCCTGCAA
CAGGCCAGCG GCGCCCCATC GGGCCGCGAC CTGGAAAGCA TGTTGGGGGC TTTTGGGGCT
GTAGCCCCCG TCAATGCTGT GCCGGAAGCT ATAGAATATG TAGCAGGAGA AGCCCGGCTG
AAGGGCTTGA AGCTGACCGC GGAGCAGCTC ACGGCGATCG CGTCCCAACT CAAACCGCAA
GGTTATGCCG TCAACGTCGA GGCTGACAAT GTGGTGATCA AACAGGTGGC TGCCTTATGA
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| Protein sequence | MTADTHQPAP MTTLIVTLPA EPLDAAALYD YVLTRDGSTV AEQSRAPLAL LPLVGKADCE
VVALVSAQRL SWHQVQLPKG TLGRRLFQDG GALRVRAVLD GLLEDRLLDD TEQLHFALEP
QPPTDAPVWV AVCERAWLRA ALQVLEQSGR AVSRIVPEFT PQALTNTLYV TGEADAAYLV
GAAEGSVAVL PLSREAMALL AGSEEKNVVA EPAVVASAEA LFQRPVTLQQ SALRQLQAAQ
SAWDLAQFDL VTSQSARTWK RWAGAARGLL SAPRWRAARL AVLALLIINL AGLNAWAWKE
KSLLNSQRQA IQAVLTTTFP QVRVVVDAPT QMAREVATLQ QASGAPSGRD LESMLGAFGA
VAPVNAVPEA IEYVAGEARL KGLKLTAEQL TAIASQLKPQ GYAVNVEADN VVIKQVAAL
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