Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0539 |
Symbol | |
ID | 3963878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 561627 |
End bp | 562886 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637915369 |
Product | hypothetical protein |
Protein accession | YP_521821 |
Protein GI | 89899350 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG ACACGCACCA ACCAGCACCC ATGACCACCC TGATCGTTAC CCTACCTGCC GAGCCGCTTG ACGCGGCTGC CTTGTACGAC TACGTGCTGA CCCGTGATGG CAGCACGGTG GCCGAGCAGT CGCGCGCTCC GCTGGCGCTG TTGCCCCTGG TGGGCAAAGC CGACTGCGAG GTGGTGGCCC TGGTGAGCGC GCAGCGTCTG TCCTGGCACC AGGTGCAGTT GCCCAAGGGC ACGTTGGGGC GGCGATTGTT TCAGGACGGT GGCGCCTTGC GCGTACGCGC GGTGCTTGAT GGCCTGCTCG AAGACCGCCT GCTCGACGAC ACCGAGCAAC TGCATTTTGC GCTGGAGCCC CAGCCGCCCA CCGATGCGCC GGTGTGGGTG GCGGTGTGCG AGCGAGCCTG GTTGCGCGCG GCTTTGCAGG TGCTGGAGCA ATCCGGGCGG GCGGTCAGTC GCATCGTGCC CGAGTTCACG CCGCAGGCGC TCACGAACAC GCTTTACGTG ACGGGTGAGG CCGACGCGGC CTATTTGGTG GGCGCCGCCG AAGGCAGCGT CGCCGTGTTG CCCCTGTCCC GGGAGGCGAT GGCGCTGCTC GCTGGATCGG AAGAAAAAAA TGTGGTGGCC GAGCCCGCCG TGGTGGCATC GGCTGAAGCG CTGTTCCAGC GCCCGGTCAC GCTGCAACAA AGTGCCCTGC GCCAGTTGCA GGCCGCGCAG TCGGCCTGGG ATCTGGCCCA GTTTGACCTG GTGACGTCCC AGAGCGCCAG AACCTGGAAG CGTTGGGCTG GTGCCGCGCG CGGCCTGCTC AGCGCGCCGC GCTGGCGTGC CGCCCGGCTG GCCGTGCTGG CGCTATTGAT CATTAATCTG GCGGGCCTGA ACGCCTGGGC CTGGAAGGAA AAGTCCTTGC TCAACAGCCA GCGCCAGGCC ATTCAGGCCG TGCTGACCAC CACATTTCCC CAGGTGCGCG TGGTGGTCGA TGCGCCGACC CAGATGGCGC GTGAGGTGGC GACCCTGCAA CAGGCCAGCG GCGCCCCATC GGGCCGCGAC CTGGAAAGCA TGTTGGGGGC TTTTGGGGCT GTAGCCCCCG TCAATGCTGT GCCGGAAGCT ATAGAATATG TAGCAGGAGA AGCCCGGCTG AAGGGCTTGA AGCTGACCGC GGAGCAGCTC ACGGCGATCG CGTCCCAACT CAAACCGCAA GGTTATGCCG TCAACGTCGA GGCTGACAAT GTGGTGATCA AACAGGTGGC TGCCTTATGA
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Protein sequence | MTADTHQPAP MTTLIVTLPA EPLDAAALYD YVLTRDGSTV AEQSRAPLAL LPLVGKADCE VVALVSAQRL SWHQVQLPKG TLGRRLFQDG GALRVRAVLD GLLEDRLLDD TEQLHFALEP QPPTDAPVWV AVCERAWLRA ALQVLEQSGR AVSRIVPEFT PQALTNTLYV TGEADAAYLV GAAEGSVAVL PLSREAMALL AGSEEKNVVA EPAVVASAEA LFQRPVTLQQ SALRQLQAAQ SAWDLAQFDL VTSQSARTWK RWAGAARGLL SAPRWRAARL AVLALLIINL AGLNAWAWKE KSLLNSQRQA IQAVLTTTFP QVRVVVDAPT QMAREVATLQ QASGAPSGRD LESMLGAFGA VAPVNAVPEA IEYVAGEARL KGLKLTAEQL TAIASQLKPQ GYAVNVEADN VVIKQVAAL
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