Gene Rfer_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0501 
Symbol 
ID3964092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp520194 
End bp520820 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID637915332 
Product17 kDa surface antigen 
Protein accessionYP_521784 
Protein GI89899313 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.38892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CTGTGTGGAC AATGACTTGC GGTCTTATTT TTTCGAGCCT GGCTGCGACC 
GCGCTGGCCC AAACACCCAT GTTGCCAAAG GCCCAGTACA CGGCCGACAG CCGGCAGGCG 
CAGGAGCGCT ACGCCGCCGA TAAAAAACTC TGCAATGACG AAGCCTCGTC CACGGCGCGC 
CTGCAATGCC GCCGCGACGC CAAGAGCGAG TACGACAAAG CCATCGCGGC GGCCAGGGCG 
CAACTGGCAG CCCAGACGCC AGCTGCCACG TCACACCAGA ATGCCACGGC GGCCTGCCCT 
GATTGCGCCC GGGTGATCGC CGTCAACGTG AGCGACAAAA AAGGCGAAGG CAGTGCCGTT 
GGCCTGATTG CTGGCGGCGT CACTGGCGCC ATATTGGGCC ATCAGGTGGG AGGCGGTTTG 
GGCAAAGACC TGGCCACGGT CGCCGGTGCA GCGGGCGGTG CGTATGCGGG CAAAAAGATT 
GAAGAAAAGG TCAAGACGCA CAAGGTGTGG ACGGTTCACG TGCAGTACCA GGACGGCCGC 
AAACACAGCT TCAGCTTCGA ACAGGACCCC GGCTTCAAAA CTGGCGATGC GGTCAGGAAC 
TCCGGCAACA GCATCGTGCG CCAGTGA
 
Protein sequence
MKKTVWTMTC GLIFSSLAAT ALAQTPMLPK AQYTADSRQA QERYAADKKL CNDEASSTAR 
LQCRRDAKSE YDKAIAAARA QLAAQTPAAT SHQNATAACP DCARVIAVNV SDKKGEGSAV 
GLIAGGVTGA ILGHQVGGGL GKDLATVAGA AGGAYAGKKI EEKVKTHKVW TVHVQYQDGR 
KHSFSFEQDP GFKTGDAVRN SGNSIVRQ