| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0454 |
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| Symbol | |
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| ID | 3963421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 460260 |
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| End bp | 461288 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915285 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_521737 |
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| Protein GI | 89899266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCA AAGGTAAAAG AATCACCGTC CACGACATGA CCCTGCGCGA CGGCATGCAC
CCCAAGCGCC ACCAGATGAC GCTGGACCAG ATGAAGGCGG TGGCGACCGG GCTCGACGCC
GCCGGCGTGC CGCTGATCGA AGTCACCCAC GGCGACGGCC TGGGTGGCGC CTCGGTGAAC
TATGGCTTCC CGGCCCACAC CGACGAGGAA TATTTGGGCA CCGTGATTCC TCTGCTCAAG
CTGGCCAAGG TGTCGGCCCT GTTGATCCCC GGCATCGGCA CTGTGGACCA CCTCCGGATG
GCGAAAGACC TGGGCGTACA CACCATCCGC GTCGCCACCC ACTGCACCGA GGCCGACGTC
TCCGAACAGC ACATCAGCCT GGCGCGCCAG CTGGAGATGG ACACGGTCGG TTTTCTGATG
ATGGCGCACA AGGCGGATTC GCAGCGCCTG ATCAGCCAGG CCCGCCTGAT GGAAAGTTAC
GGTGCCAATT GCATCTACAT CACCGATTCG GCCGGGTACA TGCTGCCCGC TGAGGTGAAG
GAAAAAACCA GCGCCGTGCG TGCGGCTTTG AGACCGGAGA CCGAACTTGG CTTTCATGGC
CACCACAACC TCGCCATGGG GGTGGCCAAC TCGGTGGTCG CCGTCGAGAG TGGTGCGACG
CGCATCGACG CGGCCGCGGC AGGCCTGGGC GCGGGCGCCG GCAATACGCC GATGGAAGTC
TTCATTGCCG TGTGCAACCG CATGGGTATA GCGACCGGCG TGGACCTGTT CAAGATGCAG
GACGTGGCCG AGGACATCGT GGTGCCGATG ATGGATCACC CGATCCGCAT TGACCGCGAC
GCCCTGATCC TGGGCTACGC CGGCGTTTAT TCATCGTTCT TGCTGTTCGC CAAACGCGCC
GAGAAAAAGT ATGGTGTTTC GGCGCGTGAA ATCCTGATTG AACTGGGCCG TCGCGGCATG
GTCGGTGGCC AGGAAGACAT GATTGAAGAC GCCGCGATGA CCATGGCCAA AGCCCGCGGC
CCCATTTAA
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| Protein sequence | MTVKGKRITV HDMTLRDGMH PKRHQMTLDQ MKAVATGLDA AGVPLIEVTH GDGLGGASVN
YGFPAHTDEE YLGTVIPLLK LAKVSALLIP GIGTVDHLRM AKDLGVHTIR VATHCTEADV
SEQHISLARQ LEMDTVGFLM MAHKADSQRL ISQARLMESY GANCIYITDS AGYMLPAEVK
EKTSAVRAAL RPETELGFHG HHNLAMGVAN SVVAVESGAT RIDAAAAGLG AGAGNTPMEV
FIAVCNRMGI ATGVDLFKMQ DVAEDIVVPM MDHPIRIDRD ALILGYAGVY SSFLLFAKRA
EKKYGVSARE ILIELGRRGM VGGQEDMIED AAMTMAKARG PI
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