Gene Rfer_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0436 
Symbol 
ID3962848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp441465 
End bp442124 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID637915267 
ProductAsp/Glu racemase 
Protein accessionYP_521719 
Protein GI89899248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.639222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCG TCGTCGTCGT TCACACCGGA CCCGCCACCA TACAGCCGAT CAAGCAGCAG 
TTTCAGCAGA TATTGCCCGA CGTGCGCGTC ATCAATATCA TGGATGACAG CCTACTCAAC
GATGTCATGG CGGCAGGCCA TCTCACCGAG GCTGTTACAG GGCGCATCTT CTCCTATATG
CAACTGGGGC AGCAAATGGG CGCCGTCGCG CTGCTCAATG CCTGCTCGTC GGTGGGCGAG
GCGGCCAGCG CTGCCCGTGC GGCCATCTCG ATCCCCATCA TCAAAATCGA CGATACCATG
GCCGAGCGCG CCGTCGCGTC GGGGCCGAGG ATTGGCGTCG TCGCGACCGT CAAGACGACG
CTCGAACCGA CGGTTCGCTT GATCAAGGCG AAGGCCGAGG CTGCGGGGAA ATCCGTCGCG
GTTACGGAGG CATTGGCCGA AGGGGGCTTC CAGGCGCTAC TGGACGGTAA GTCCGAGTTG
CATGACGAGA TCGTCAAGCG CACGATTCAG TCCCTGGCCG GCAAAGTTGA TGTCATCGTA
CTGGCACAGG TGTCGATGGC ACGACTGGTC CCCTCACTCA CCGACATGAA GGTGCCCGTC
CTGTCCTCGC CGCAAAGCGG CGTCGAGGCA GTGCGTGACG CCTTGGCCAG TCGGCACTGA
 
Protein sequence
MRTVVVVHTG PATIQPIKQQ FQQILPDVRV INIMDDSLLN DVMAAGHLTE AVTGRIFSYM 
QLGQQMGAVA LLNACSSVGE AASAARAAIS IPIIKIDDTM AERAVASGPR IGVVATVKTT
LEPTVRLIKA KAEAAGKSVA VTEALAEGGF QALLDGKSEL HDEIVKRTIQ SLAGKVDVIV
LAQVSMARLV PSLTDMKVPV LSSPQSGVEA VRDALASRH