| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0409 |
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| Symbol | |
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| ID | 3962783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 415810 |
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| End bp | 416631 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915242 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_521694 |
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| Protein GI | 89899223 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.934009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGCC TGCCCAGCAA AGCCAAAAAC CTGCAGATTG CGCCGTTTAG CGACACGCTG
CCCGCGCCCA TCGTATTTCG CAGCGCCTAC GTCCCCGCAG AAGGCATGTA CCCGCAACAC
CGCCATGCGT GGGGGGAGTT TGTTTACTCG TTCAGCGGCG TCATGGAGGT CAAGCTGGCC
GACCACCACT ACCTCGCACC ACCGCAGTAC GGCATCTGGC TGCCGCCCGA TGTGGAGCAT
GTGGGCCTGA ACCGCTATGA GGCCGTGCAC TGCTCGCTGT ACATCGCGCC CCAGGGCTGT
GGCAACCTGC CCCGCGCCGC CTGTGCGCTG ACGGTGAGCC CGCTGGTGCG CGCCCTGCTG
GAGCACCTGC GCCAGCAGCC GCCCGAGCAG CCCGGCACGC TGCAGGACGA GCGCCTGCTG
CGGGTGCTGG TGGACCAGCT GGCGCTGGCA CCCTGTGCCG GCAGCTACCT GCCCAGTTCC
GACGACGCCC TGCTGGGGGC GGTGCTGCGC ATGCTGGAAG AGCAGCCCGG CGACAACCGG
TCATTACCCG AACTGGCCCA TGCCGTCCAC ACCACCGAGC GCACGTTGAT GCGCCGAGCC
CGGCGCGACC TGGGCATGTC GTTTGTCGAG TGGCGCCAAC GCCTGCGGGT GGTGAAAGCC
ATGCCGCTGC TGGAGGCCGG CCAGACGGTG GAGACCATTG CTCTGGACCT GGGCTACGGC
AGCGCATCGG CCTTCATCAC CATGTTCAAG CGGCTGGTGG GGACGACGCC AGACGAGTTC
CGCAAAGGCG CGGATGGACG CATCAACGCG GGTACAAAAT AG
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| Protein sequence | MRSLPSKAKN LQIAPFSDTL PAPIVFRSAY VPAEGMYPQH RHAWGEFVYS FSGVMEVKLA
DHHYLAPPQY GIWLPPDVEH VGLNRYEAVH CSLYIAPQGC GNLPRAACAL TVSPLVRALL
EHLRQQPPEQ PGTLQDERLL RVLVDQLALA PCAGSYLPSS DDALLGAVLR MLEEQPGDNR
SLPELAHAVH TTERTLMRRA RRDLGMSFVE WRQRLRVVKA MPLLEAGQTV ETIALDLGYG
SASAFITMFK RLVGTTPDEF RKGADGRINA GTK
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