| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0403 |
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| Symbol | |
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| ID | 3961617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 408622 |
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| End bp | 410157 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915236 |
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| Product | peptidase M20 |
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| Protein accession | YP_521688 |
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| Protein GI | 89899217 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGC GCCGTGGCAT GATCACAGGC ATTGTTGACA AACCACGCAA GGAATTTGGT
ATGAATGTAC GCATCCCGGC CCCGGCTTTG AACACCACCC AGGCGCTGAA CCAGATCAGT
CGTGCCTGGG ACGACGACCT CGTGGCCCAG CTCAGCGACT ACATCGCCAT CCCTGCCAAG
TCGCCCATGT TTGATGCCGA CTGGGTACAG CACGGCTTTA TCGACACCGT GGTGCGCAAT
GCCGCGAGCT GGGTCGAGGC GCAGAAGGTG GCCGGCTTGA CACTGGAAAT CATCCGCCTG
CCCGGGCGCA CGCCGGTGCT GTTTTTTGAA GTGGCGGCGT CCACCGGCAG CGCCAATCAC
GCGGTGTCGA ACCAGACGGT GTTGATGTAC GGCCACCTGG ACAAGCAGCC CGAGGTCACC
GGCTGGCGCA GTGACCTCGG ACCCTGGACG CCGAAATATG AAGACGGCAA ACTCTATGGC
CGTGGCGGTG CCGACGATGG GTACGCCATC TATGCCGCCA TCACCGCCAT CCAGGCACTC
AAGAGCCAGC ACGTGGCGCA CCCGCGCATC GTGGGCCTGA TCGAAACCTG CGAAGAAAGC
GGCTCCTATG ATTTGCCGCC CTACATCGAC GCGCTGCGCG CGCGGCTGGG CGACGTGGCG
CTGGTGATCT GTCTGGACTC GGGCGCGGGC AATTACGACC AGCTCTGGCT GACCAACAGC
CTGCGCGGCA TGGCCAGCGG CACGCTCAAG GTTGAGGTGT TGACCGAGGG TGTGCATTCG
GGCGATGCCA GCGGCCTGGT GCCCTCGAGC TTTCGGATTC TGCGTCACCT GCTGGACCGG
CTCGAAGACA GCGCGACCGG CCGCCTGCTG CCCGCGCCGT TTCACTGCGA GGTGCCCTTT
GAGCGCTTGC GCCAAGCCCA AGCCACCGCC GCCATTTTGG GCGAGGAGCT CTACAAGCGC
TTCCCCTGGG CGCACGCGGA TTGCGGCGGC GCCAGCCAGA CCATGCTGCC CACCACCACC
GACCCGCTGC AAGCGCTGCT GAGTCGCACC TGGACCCCCA CGCTCAGCGT CACGGGCGCA
GAAGGTCTGC CCGAGCTGAA AAGCGCGGGC AACGTGCTGC GCCCCTTCAC CGCCTTCAAG
CTCAGCCTGC GCCTGCCGCC GCTGGTGGAG GCAGGCCAAG CCGTGCAACA GCTCAAGGCG
CTGCTGGAAG ACAACGCCCC TTACCAAGCG CGGGTGAGTT TTGTACCCGA CTCCCACGCC
AGCGGCTGGA ACGCCCCCAG CACCGCCCCG TGGTTTGAAC AGGCCTTGAA CGCGGCCTCG
CAAGACTACT TTGGCGCCCC CTGCGGCTAC ATCGGCCAGG GCGGCACCAT TCCGCTCATG
AGCATGCTGT CCAGCGGCTT TCCGAAGGCG CAGATGATGG TCTGCGGCGT ACTCGGCCCC
AAGAGCAACG CGCACGGGCC CAATGAGTTC CTGCATGTGC CCTATGCCAA GAAGTTGACC
GCCGCCGTGG CGCAGGTGAT CGCCCAGGTG CCGTGA
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| Protein sequence | MAVRRGMITG IVDKPRKEFG MNVRIPAPAL NTTQALNQIS RAWDDDLVAQ LSDYIAIPAK
SPMFDADWVQ HGFIDTVVRN AASWVEAQKV AGLTLEIIRL PGRTPVLFFE VAASTGSANH
AVSNQTVLMY GHLDKQPEVT GWRSDLGPWT PKYEDGKLYG RGGADDGYAI YAAITAIQAL
KSQHVAHPRI VGLIETCEES GSYDLPPYID ALRARLGDVA LVICLDSGAG NYDQLWLTNS
LRGMASGTLK VEVLTEGVHS GDASGLVPSS FRILRHLLDR LEDSATGRLL PAPFHCEVPF
ERLRQAQATA AILGEELYKR FPWAHADCGG ASQTMLPTTT DPLQALLSRT WTPTLSVTGA
EGLPELKSAG NVLRPFTAFK LSLRLPPLVE AGQAVQQLKA LLEDNAPYQA RVSFVPDSHA
SGWNAPSTAP WFEQALNAAS QDYFGAPCGY IGQGGTIPLM SMLSSGFPKA QMMVCGVLGP
KSNAHGPNEF LHVPYAKKLT AAVAQVIAQV P
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