Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0400 |
Symbol | |
ID | 3961614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 406565 |
End bp | 407182 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915233 |
Product | TetR family transcriptional regulator |
Protein accession | YP_521685 |
Protein GI | 89899214 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCG ACAACGCCGT CAGAACCTCG TTCAAGCAGC AAATGCTCCA GGCCCGCGAA GAGGCCATTA TTCAAACCGC GAATCGGCTG CTGGCTGAAA AAGGCTTTGA AGCCATGACG GTCGATGAGG TGGCGCTCCA GGCGGGTATT GCCAAAGCCA GCCTTTACAA ACACTTTGCC AGCAAGGAAG AGCTGGCGGC GGCGGCGACG GCGCGGGTGA TGCGCCGGGC GCGGGATTTC ATCCGTGCGC TGCCGGAGCA AGCGCCGCCG CTGGACAAGC TGCGTGCCGT GCTGCGATGG ACGCTGGAAG TCAAATTGGC GGGCGATATG CCGTCCTTGC CCAGCCGGAA CTCCACGTTG CGTACCGCGC TGATTGGCAA CCAAGACTGC ATGGAGGGTT GGATGGAAGT GAGTGACCGC CTGCGCGCAT GGATCGAGGC CGCGCAAGCC GCCGGGGCAC TCAACCCGGC GCTGCCTGCG GTTGCCGTTT TGTACACCTT CTTTGCCCGC GCCTGCGATC CGGCGCTGGA GTTTCTGAGG ATCGGTGGCC GCTACCAGGA TGAGCAAATC GTGACCCTGG TGCTCAGCAC CTGCTTTGAG GGTCTAAATG CCCGCTAG
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Protein sequence | MNPDNAVRTS FKQQMLQARE EAIIQTANRL LAEKGFEAMT VDEVALQAGI AKASLYKHFA SKEELAAAAT ARVMRRARDF IRALPEQAPP LDKLRAVLRW TLEVKLAGDM PSLPSRNSTL RTALIGNQDC MEGWMEVSDR LRAWIEAAQA AGALNPALPA VAVLYTFFAR ACDPALEFLR IGGRYQDEQI VTLVLSTCFE GLNAR
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