| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0391 |
|---|
| Symbol | |
|---|
| ID | 3961605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 399063 |
|---|
| End bp | 400100 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637915224 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_521676 |
|---|
| Protein GI | 89899205 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2187] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.601619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA TTGAGGCCAA GCTGAAGTTC TTGCGATCGC CTGCAAGCTA CGGATCCTTG
GGTCAGCAGG TCGAGCTCAT CGAAACCCAC ATGTCATGGG TTTTCGTGCT GGAGCAACGG
GTCTTCAAAC TTAAAAAACC TGTTTGTTTC CCGTTTCTCG ATTTCAGCAC CCTGCAGGCG
CGCGAGTTTT ATTGTCGTGA AGAAGTTCGG CTGAACGCGC GTCTGGCGCC GGGGGTCTAT
CTCGGCGTGG TGGCCTTGCA ATGGCAGGAT GGCGCCTTCG CCCTGGTGCC CGAAGCGCAA
TGGCCGGCTC CCGGAGAAAC CGTTGACTGG CTGGTTGTGA TGCGGCGCCT GCCACGGCAG
CGCATGCTGT CCGAACTGAT TGCGCGCCAC AGTGTCGCAA GAAGCGACAT TGACGCGCTG
CTTGCCTTGC TTGGCGCGTT CTACCGGGCG GCGCCGGCAG CTCCCGTGAG TGCGAACGAC
TATGTGTCGC GCTTGCGCCA TGAGCAGGCC TTGAACCGGG AGGTGCTGCT GCGCCCCCAG
TTTGTGCTCC AGGATGTGCG GCTGGCCATT GAACGCCTGG ATGCGGCGCT GGCACAGTGC
ACCGACTTGT TGCGGGCTCG CGCCTCGCGC CGTCATGTGC TGGACGGGCA CGGTGATCTA
CGACCTGATC ATGTCTGCCT GCTCGATCCC CCGGTGGTGA TTGACTGCCT GGAGTTCAAC
CCGCAATTGC GCCAGGTTGA CCCCTTTGAT GAAGTGGCCT ACCTGGGCCT GGAGTGCGAC
TTGGCGGGTG CTCCCTGGAT TGGTTCGCAG CTGGTCGCGG GCATCGCCGA CGCGCTGGGC
GATCATCCTG GGCCAAGCCT GATGCATTTT TATACCGCGT ACCGTGCCAT GTTGCGTGCA
CGCCTGGCGA TGGCGCATCT GCTCGATCCG CGACCGCGCT CGCCTGAAAG GTGGCCAGCG
CAGTCCGAGC GGTATATTGC GCATGCCCTG GTGGCGCTGG ACGCCTTCAA CCAGACCATG
CACCTGCAGA CGCCTTGA
|
|---|
| Protein sequence | MPDIEAKLKF LRSPASYGSL GQQVELIETH MSWVFVLEQR VFKLKKPVCF PFLDFSTLQA
REFYCREEVR LNARLAPGVY LGVVALQWQD GAFALVPEAQ WPAPGETVDW LVVMRRLPRQ
RMLSELIARH SVARSDIDAL LALLGAFYRA APAAPVSAND YVSRLRHEQA LNREVLLRPQ
FVLQDVRLAI ERLDAALAQC TDLLRARASR RHVLDGHGDL RPDHVCLLDP PVVIDCLEFN
PQLRQVDPFD EVAYLGLECD LAGAPWIGSQ LVAGIADALG DHPGPSLMHF YTAYRAMLRA
RLAMAHLLDP RPRSPERWPA QSERYIAHAL VALDAFNQTM HLQTP
|
|---|
| |