| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0386 |
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| Symbol | |
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| ID | 3964288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 393966 |
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| End bp | 394955 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637915219 |
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| Product | transketolase |
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| Protein accession | YP_521671 |
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| Protein GI | 89899200 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGGC GCATCAGCTA CCGGGACGCG CTGAGGGAGG CGCTGCGCGC GGCGCTGCAG
TCGGACCCGC GCGTTTTCCT GATGGGCGAG GACGTGGGTT GCTACGGCGG CACCTATGCC
GTGTCCAAGG GCCTGCTGGA GGAGTTCGGC CCCGAGCGCA TCCGTGACAC GCCACTGTCG
GAACTCGGCT TCGTCGGCGC CGGTATTGGC GCCGCACTGG GCGGCATGCG CCCGATCGTG
GAAATCATGA CGGTCAACTT CAGCCTGCTG GCGCTCGACC CCATCGTCAA CAGCGCGGCC
ATGTTGCACC ACATGTCGGG CGGACAGTTC TCGGTGCCCC TGGTGATCCG CATGGCCACC
GGTGCCGGGC GTCAGGTGGC GGCCCAGCAC TCGAACAGCT TTGAGTGCTG GTACGCGCAT
GTGCCGGGCC TGCGCGTGTT GGCGCCGGCC ACGGTGGAGG ATGCGCGCGG CATGCTGCAG
GCCGCCCTGG CCGACCCCGA CCCGGTGCTG ATCTTCGAGC ACGCGCAGCT CTACAACAGC
GAGGGCGAAC TACCCGACGA TGAGTCGGCG GCGGTGGACA TTGCCGGCGC CCGCGTGCGC
CGCACGGGTT CGGATATCAG CCTGATCACT TATGGCGGCT GTCTGCCCAA GGCCCTGCAG
GCCGCTGACG AACTCGCCAG TCTTGGGATT TCTGCCGAGG TGATCGACCT GCGGGTGCTG
CGCCCGCTTG ATGACGCCAC CGTAATGGCT TCGGTGCGCA GGTGCCGCCG CGCAGTCGTG
GTGGATGAGG GCTGGCGCTC CGGCAGCCTG GCGGCCGAGG TGATGGCACG CATCAGCGAG
CAGGCTTTTT TTGACCTGGA CGCGCCGCCG GCGCGCGTGT GCAGCGAGGA GGTGCCGATT
CCGTATGCCC GGCACCTGGA AGAGGCGGCG CTGCCGCAGG TGCCGAAAAT CGTGGCGGCG
GTGCAAGCGG TGATGGGCGC CGCAGCATGA
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| Protein sequence | MGRRISYRDA LREALRAALQ SDPRVFLMGE DVGCYGGTYA VSKGLLEEFG PERIRDTPLS
ELGFVGAGIG AALGGMRPIV EIMTVNFSLL ALDPIVNSAA MLHHMSGGQF SVPLVIRMAT
GAGRQVAAQH SNSFECWYAH VPGLRVLAPA TVEDARGMLQ AALADPDPVL IFEHAQLYNS
EGELPDDESA AVDIAGARVR RTGSDISLIT YGGCLPKALQ AADELASLGI SAEVIDLRVL
RPLDDATVMA SVRRCRRAVV VDEGWRSGSL AAEVMARISE QAFFDLDAPP ARVCSEEVPI
PYARHLEEAA LPQVPKIVAA VQAVMGAAA
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