| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0355 |
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| Symbol | |
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| ID | 3962482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 356177 |
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| End bp | 357037 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915187 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_521640 |
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| Protein GI | 89899169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.181916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTGAATCG TTACTTTGGC AAAGCCTGGC TGGCGGTCAC CTTCTTGTTT
TTGTATTTGC CGCTGTTTTT CATGCTGGTG TTCTCGTTCA ACAATACCCG CCAGGACGCG
GTGTTCACCG GCTTCTCACT GCGCTGGTAC GAGGCTTTGA CGCGTGACAC CAAGATTGTC
GATGGCTTTT GGTTGTCCGT GCAGGTTGCC ACGGCGGCTG GTGTGGCCTC GGCGGTGCTC
GCCACTTTTG CGGCTTTTGT ATTGGTGCGT TACCGCCGCT TTGCCGGGCG CACACTTTTT
TCTGGCATGG TGAATGCGCC GCTGGTCATG CCCGAGGTGG TCATTGGCTT GTCGCTGCTG
CTGTTGATGG TGGGCGTGCA AAACGCCCTG GGCTGGCCGC AACGCGGCAT GCTGACCATT
GTGCTGGGGC ATATGTTGCT GGGCATGGCG TATGGCACGG TGGTGGTGCA GTCGCGCTTG
CTGGAGATGG ATCGCGCCAT TGAAGAAGCC GCCATGGACT TGGGTGCGAA ACCGTTTCAG
GTGTTCTTTT TGGTCACCCT GCCAAATATT TTGCAGGCTG TCTTGGCTGC GTATTTGCTG
GCGTTTACCT TGTCGTTTGA CGATGTGGTG ATCGCCGAGT TCTTGTCCGG CCCGGGGGTC
AACACCTTGC CGCAGGTGAT TTTTGGCTAT GCCAGGCGCG GTATCAATCC GACCATTTAC
GCGGCTGCCA CGCTGCTGAT TGCGTCGGTG ACGCTGGTGG TCATCACCTA CAGTGTGTGG
GTGGCGCGCC AGACACGCAA ACGTGAGCGT GAAATTGCGG CCGCTACACG CGCTGAACTG
CTTGCTTTGC AGGCGCAGTA G
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| Protein sequence | MKKLLNRYFG KAWLAVTFLF LYLPLFFMLV FSFNNTRQDA VFTGFSLRWY EALTRDTKIV
DGFWLSVQVA TAAGVASAVL ATFAAFVLVR YRRFAGRTLF SGMVNAPLVM PEVVIGLSLL
LLMVGVQNAL GWPQRGMLTI VLGHMLLGMA YGTVVVQSRL LEMDRAIEEA AMDLGAKPFQ
VFFLVTLPNI LQAVLAAYLL AFTLSFDDVV IAEFLSGPGV NTLPQVIFGY ARRGINPTIY
AAATLLIASV TLVVITYSVW VARQTRKRER EIAAATRAEL LALQAQ
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