| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0346 |
|---|
| Symbol | |
|---|
| ID | 3961385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 345267 |
|---|
| End bp | 346187 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637915178 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_521631 |
|---|
| Protein GI | 89899160 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGG GTCAATTTTC GTACGCCAAC AACAGCAATC GTTTCCTCGC GGTGCCCGAG
CTGGCTGCTC AGCCATTCGC GGTGGTCGGC GTTCCTTTTG ATGGGGCTGT GACCCATCGA
CCCGGCGCCC GCTTTGGGCC GCAGGAGATC CGGCGCGCCA GCTTGATGCT GTGCGACGGT
TCACATCCGT TTTTTGGCGT CTCACCGATC GGCCACCTTG GCGATGCCCT TGACATGCGC
CTGCCCAATG CATCACCACT GGCCGACGTG CGCCAGCAGA TCCAGGCGCA GGCAGCGGCG
CTGATGGCCG GGCACCACTG CGTTTTCCTG GGCGGAGATC ATTCGGTCAC CTTGCCCCTG
TTGCGCGCGG CCCGGGCGCA GCATGGTGAA CTCGCCCTGG TGCACTTTGA TGCGCACTGC
GATACATGGA CCGATCATTT CGGCGAGCCT TCGGGCCACG GCACCTGGGC CTACGAGGCG
ATGGCTGAGG GGCTGGTGAG CCCGCGGCAT ACGGTGCAAA TCGGGCTGCG TTCCAGTGGC
GAACGGGCAG CCCGCGAGTA TGTGCAGGAT CAAGGTGGTT TGATTTTCAC CGCCCGGCAA
TTGCGCGGAC TCGATGGGGC CGGGTTGCAA CCGGTGATCG CGCAAATTCG GACCCGACTG
GGCCAGCGCC CTTGTTATTT GACACTGGAT ATCGACTGTC TCGATCCGGC GTTTGCACCC
GGCACCGGCA CGCCGGAGCC GGGCGGCCTG AGCAGCTCGC AAGTGCTGAC CTTGCTGGAA
GAGTTGGCGC CGCTCAACAT GATTGGCATG GATTGCGTGG AGGTGGCGCC GGCTTATGAC
CATGCTGAAC TCACCAGCAG TGCGGCCGCC ACGCTGGTTT GGACTTATCT GTGCGGCCAG
GTGGCCAAAG TCCTGCTTTG A
|
|---|
| Protein sequence | MGLGQFSYAN NSNRFLAVPE LAAQPFAVVG VPFDGAVTHR PGARFGPQEI RRASLMLCDG
SHPFFGVSPI GHLGDALDMR LPNASPLADV RQQIQAQAAA LMAGHHCVFL GGDHSVTLPL
LRAARAQHGE LALVHFDAHC DTWTDHFGEP SGHGTWAYEA MAEGLVSPRH TVQIGLRSSG
ERAAREYVQD QGGLIFTARQ LRGLDGAGLQ PVIAQIRTRL GQRPCYLTLD IDCLDPAFAP
GTGTPEPGGL SSSQVLTLLE ELAPLNMIGM DCVEVAPAYD HAELTSSAAA TLVWTYLCGQ
VAKVLL
|
|---|
| |