Gene Rfer_0325 details

Gene Information

• Locus tag: Rfer_0325
• ID: 3961286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 323822
• End bp: 324535
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637915157
• Product: TetR family transcriptional regulator
• Protein accession: YP_521610
• Protein GI: 89899139
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAACC CTGATCCCCG AAGTCGCCTA CTGAAGGCGG CGATTCGTTT GCTGGCCACC 
CATGGCCCCA CGGAAATCAA GGCGCGCTCG GTATCCAGTG AAGCCGGTCT TTCGACGATG 
GGGGTCTACA CGCACTTCGG CGGCGTTTCA GAACTGCTCC AGGCGGTGGC AGAAGAAGGA 
TTCCGGCAAC AGGCAGACAT CTTCAGGCAG GTCGCGAACA CCCAAGACGC CATGACCGAT 
TTGTGTGCCA TTGCGCTGGC CTGCCGGGAC TTCGCCATGC GCAACGCGCA CCTGTATGAC 
CTGATGTTTG GCTTGTCGAT TCAGGGCAGA TACGGTCCCG TGCGGGGAGA GTCGACCACT 
GCGCCAAAGG TAGGTGCGGA CGCATTCATG GCGTCCTACT CACACCTGCG GGGAGGATGC 
GAGCGCCTGA TCAAAGGCAA CTGCGTGCGC CAGATGGAAC CGGACCTTAT GGCTGCACAG 
CTATGGAGCA CATTGCACGG GTTCATATTG TTGGAACTCG GCGGCCATTT CGCGGCGACA 
TTAAATCCGC CGATCGAAAT ACTGGTGCCC ATGTGCATCA ACCTCGTTGT CGGGCTTGGT 
GCTGATCGTG AGCGCGCAAA GGCGTCGGCT GCAATTGCTG TGGCCGATTG GGCGAGCCGC 
CAATGTGATA CGAAATCCAT GGCGCAGTTT TTGAACGCAG TCAACACGAT CTGA 

 

Protein sequence

MVNPDPRSRL LKAAIRLLAT HGPTEIKARS VSSEAGLSTM GVYTHFGGVS ELLQAVAEEG 
FRQQADIFRQ VANTQDAMTD LCAIALACRD FAMRNAHLYD LMFGLSIQGR YGPVRGESTT 
APKVGADAFM ASYSHLRGGC ERLIKGNCVR QMEPDLMAAQ LWSTLHGFIL LELGGHFAAT 
LNPPIEILVP MCINLVVGLG ADRERAKASA AIAVADWASR QCDTKSMAQF LNAVNTI