Gene Rfer_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0303 
Symbol 
ID3960326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp303859 
End bp304545 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID637915136 
ProductTetR family transcriptional regulator 
Protein accessionYP_521589 
Protein GI89899118 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.402109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCCCG CATACTGGTA CTGCCGCCAT GCCTTGATCA GCCTGTTGCA TGCTGGAATA 
AATTGTTGTA TGATGCTCGT CATGCGAAAT TCACCATCCA ATATCCGAAC CGCAGCCAAA 
GAAGCTTCGC ACGAGCGCAT CGTCGATGCC GCGGCACGCG CCATCCGTCG TAGCGGCTAT 
GACGGCACGG GTGTTGCCGA CATCATGAAA GAAGCCGGCC TGACGCATGG CGCCTTTTAC 
GCCCATTTTG CGTCTCGCGA AGCCATGCTG GCCGAAGCGG CGGACCGTGC GGGTGCCGAA 
GCCAACGCCG CTGCGGCGAG TGTCATCGCG GCAGTGCCGC CCGAGCGGGC GCTGCAGGCC 
CTCATGCAGG TCTATCTTTC CAAGGAGCAT CTGGAGAGCA TTGAGACCGG TTGCCCGATT 
TCAGCCCTGG GTTCCGAGAT GCCGCGCCAA TCGCCCGAGG TGCGCCGCGC CGCCACGCGC 
CGTATCAAGG AGATGGTTGA TCTCGTCGCC CGCCAGTTCC CGGACTGGGG GCAACCCGGC 
GCGCATGAGC GTGCGCTGGT GACCGTGGCC ACGATGGTTG GCACTTTGAT GCTGGCCCGC 
GCTGTCAATG ATTCCGCATT GTCCGACGCG CTGCGTAGCG CGACATTGAA GAGCCTGAGT 
CTGGCTAAGC CTGCATCCAC CGACTGA
 
Protein sequence
MWPAYWYCRH ALISLLHAGI NCCMMLVMRN SPSNIRTAAK EASHERIVDA AARAIRRSGY 
DGTGVADIMK EAGLTHGAFY AHFASREAML AEAADRAGAE ANAAAASVIA AVPPERALQA 
LMQVYLSKEH LESIETGCPI SALGSEMPRQ SPEVRRAATR RIKEMVDLVA RQFPDWGQPG 
AHERALVTVA TMVGTLMLAR AVNDSALSDA LRSATLKSLS LAKPASTD