Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0303 |
Symbol | |
ID | 3960326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 303859 |
End bp | 304545 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915136 |
Product | TetR family transcriptional regulator |
Protein accession | YP_521589 |
Protein GI | 89899118 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.402109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCCG CATACTGGTA CTGCCGCCAT GCCTTGATCA GCCTGTTGCA TGCTGGAATA AATTGTTGTA TGATGCTCGT CATGCGAAAT TCACCATCCA ATATCCGAAC CGCAGCCAAA GAAGCTTCGC ACGAGCGCAT CGTCGATGCC GCGGCACGCG CCATCCGTCG TAGCGGCTAT GACGGCACGG GTGTTGCCGA CATCATGAAA GAAGCCGGCC TGACGCATGG CGCCTTTTAC GCCCATTTTG CGTCTCGCGA AGCCATGCTG GCCGAAGCGG CGGACCGTGC GGGTGCCGAA GCCAACGCCG CTGCGGCGAG TGTCATCGCG GCAGTGCCGC CCGAGCGGGC GCTGCAGGCC CTCATGCAGG TCTATCTTTC CAAGGAGCAT CTGGAGAGCA TTGAGACCGG TTGCCCGATT TCAGCCCTGG GTTCCGAGAT GCCGCGCCAA TCGCCCGAGG TGCGCCGCGC CGCCACGCGC CGTATCAAGG AGATGGTTGA TCTCGTCGCC CGCCAGTTCC CGGACTGGGG GCAACCCGGC GCGCATGAGC GTGCGCTGGT GACCGTGGCC ACGATGGTTG GCACTTTGAT GCTGGCCCGC GCTGTCAATG ATTCCGCATT GTCCGACGCG CTGCGTAGCG CGACATTGAA GAGCCTGAGT CTGGCTAAGC CTGCATCCAC CGACTGA
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Protein sequence | MWPAYWYCRH ALISLLHAGI NCCMMLVMRN SPSNIRTAAK EASHERIVDA AARAIRRSGY DGTGVADIMK EAGLTHGAFY AHFASREAML AEAADRAGAE ANAAAASVIA AVPPERALQA LMQVYLSKEH LESIETGCPI SALGSEMPRQ SPEVRRAATR RIKEMVDLVA RQFPDWGQPG AHERALVTVA TMVGTLMLAR AVNDSALSDA LRSATLKSLS LAKPASTD
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