Gene Rfer_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0235 
Symbol 
ID3962293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp233909 
End bp234439 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID637915070 
ProductAsnC family transcriptional regulator 
Protein accessionYP_521523 
Protein GI89899052 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGAAT TTATTGACCC CACCGATCGG CGCCTAGCCA AGCTGCTTTC CAGCGACGCG 
CAGGACAGCG TGAACCAACT GGCGGACAAA TTGCAGCTGA GTCCGCCAAC GGTCCGGACA
CGCTTGAGGT CTTTGATCGA GAAAAATGTT CTGAAGATCG TGGGCTTGCT AAACCTGTCG
GAACGGCCCG AGTTGATCGC TGCCGTTGTG GGCATCAATG CCAATGCGCA GGGGCACATG
GACGACCTCA TGAAGAAGAT CGCAGAACTG CCATTTGTAA CTTCCGTGAG TCTCGTTACC
GGTCGTTTCG ACTTGATTGT GGAGGTACTG GTGGCCGGAG ATGTGCAGGA TCTTTACCGG
GTCACGAGCG AACTTCTGCC CAAGGTTGCT GGCCCCGGGG TTGTCAGCCG CAGTGAAACG
TTTGTGGTGA TGAAGTCGCA TAACAAATGG ATCAACCTCC CGCGTGGATG CTGGGAGCAG
GGTGGCAATG AGGAGCAGCT GACCACCTTA TCGAAACCCA AAAAGCGATG A
 
Protein sequence
MREFIDPTDR RLAKLLSSDA QDSVNQLADK LQLSPPTVRT RLRSLIEKNV LKIVGLLNLS 
ERPELIAAVV GINANAQGHM DDLMKKIAEL PFVTSVSLVT GRFDLIVEVL VAGDVQDLYR
VTSELLPKVA GPGVVSRSET FVVMKSHNKW INLPRGCWEQ GGNEEQLTTL SKPKKR