Gene Rfer_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0221 
Symbol 
ID3960127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp219922 
End bp221349 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content60% 
IMG OID637915056 
Productbenzoyl-CoA oxygenase component B 
Protein accessionYP_521509 
Protein GI89899038 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03225] benzoyl-CoA oxygenase, B subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAA TCACCTACAG CGACAAGATT CCCAACAACG TCAACCTGAG CGAAGACCGC 
ACCCTGCAGC GCGCGCTGGA ACAGTGGCAG CCCAACTACC TGAAATGGTG GGGTGACATG
GGTCCCGATG ATTCGCAGAA TTTTGACGTC TACCTGCGCA CTGCCGTCAG CGTCGATCCG
CAGGGCTGGG CGCAGTTCGG CCATGTGAAG ATGCCCGACT ACCGCTGGGG CATCTTCCTG
AACCCGGCCG AGAAGGACCG CAAGATCCAC TTCGGTGACC ACAAGGGTGA AGACGCCTGG
CAAGACGTGC CGGGCGAGTA CCGCGCCAAC CTGCGCCGCA TCATCGTCAC GCAGGGCGAC
ACCGAGCCCG CGTCCGTGGA GCAGCAACGC CACCTCGGCC TGACCGCGCC CAGCCAGTAC
GACCTGCGCA ACCTGTTCCA GGTCAACGTG GAAGAAGGGC GCCACCTGTG GGCCATGGTC
TACCTGCTGC ACAAGTACTT CGGCCGCGAT GGCCGTGAAG AAGGCGAAGC CCTGCTGGCG
CGCCGCAGCG GCCAGGAGAA CAACCCGCGC ATTCTGCAGG CCTTCAACGA AGAAACGCCG
GATTGGCTGA GCTTTTTCAT GTTCACCTAC TTCACCGACC GCGACGGCAA GTTCCAGCTC
TGCGCCCTGG CTGAAAGCAG TTTTGATCCG CTGGCCCGCA CCACCAAGTT CATGCTCACG
GAAGAAGCTC ACCACATGTT TGTGGGCGAA AGCGGCATCT CACGCATCAT CCAGCGCACC
TGCCAGGCCA TGAACGAGAT GAAGACCGAC GACGTGAGCA AGCTGCGCGC CGCCGGTGTC
ATTGACCTGC CGACCATCCA GCGTTACCTG AACTTCCACT TCAGCGTCAC CATCGACCTG
TTTGGTGCCG ACGAATCGAG CAACGCTGCC ACCTTCTACA ACACCGGCCT CAAGGGCCGC
TTTGAAGAAG GCAAGCGCAT GGATGACCAC CAGCTCAAAG GCGGCACCTA CAAGGTACTC
AATGTGCAAG GCGGCCAGCT GGTCGAGAAG GAAGTGCCAA TGCTCAACGC GCTCAATGAA
GTGCTGCGCG ACGACTACAT CAAGGACTCC ATCGGTGGGG TTGAGCGCTG GAACAAAGTC
ATTGAAAAGT CCGGCATTCC GTTCAAGCTG AAAGTGCCGC ACAAGGCTTT CCACCGCAAC
ATCGGCGCGC TGGCGCAAGT CAAGGTATCG CCAGAAGGCC GCGTGCTGAG CGATGCCGAG
TGGAAAGCCA ATGTGGACAA CTGGCTGCCC AGTGAAACTG ACCGCGCTTT TGTCGGCAGC
CTGATGGGCC GTGTGGTGGA AGCCGGCAAG TTTGCCAACT GGATCGCGCC GCCGATGCTG
GGCATCAACC GTCAGTCAGC GGACTTCGAG TACGTGCGCT TCAACTGA
 
Protein sequence
MSSITYSDKI PNNVNLSEDR TLQRALEQWQ PNYLKWWGDM GPDDSQNFDV YLRTAVSVDP 
QGWAQFGHVK MPDYRWGIFL NPAEKDRKIH FGDHKGEDAW QDVPGEYRAN LRRIIVTQGD
TEPASVEQQR HLGLTAPSQY DLRNLFQVNV EEGRHLWAMV YLLHKYFGRD GREEGEALLA
RRSGQENNPR ILQAFNEETP DWLSFFMFTY FTDRDGKFQL CALAESSFDP LARTTKFMLT
EEAHHMFVGE SGISRIIQRT CQAMNEMKTD DVSKLRAAGV IDLPTIQRYL NFHFSVTIDL
FGADESSNAA TFYNTGLKGR FEEGKRMDDH QLKGGTYKVL NVQGGQLVEK EVPMLNALNE
VLRDDYIKDS IGGVERWNKV IEKSGIPFKL KVPHKAFHRN IGALAQVKVS PEGRVLSDAE
WKANVDNWLP SETDRAFVGS LMGRVVEAGK FANWIAPPML GINRQSADFE YVRFN