| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0216 |
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| Symbol | |
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| ID | 3960122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 213331 |
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| End bp | 214929 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915051 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_521504 |
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| Protein GI | 89899033 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAA GCACCACAAC AGACATGCCA GCGGTTACGC CACCTGGGGA TAGCTTCAAC
TTTGCCCAGC ACTTGCTGAG CTGCAACAGC CAACGTGCCA GCAAAGTCGC GTTCATCGAC
GACCAGGGCG CACTCAGCTA TGGCCAGTTG AACGAACGGG TACGCCGGGT GGCGGCGGGT
CTGCGCTCAC TGGGCATCAA GCGCGAGGAA CGTGTGCTGC TCTTGATGCA CGACTGCAAT
GATTGGCCGG TGAGTTTTCT CGGTGCCATG TACGCCGGTA TCGTGCCGGT AGCTGTGAAC
ACGCTGCTGA CCGCCGATGA CTACGCCTAC ATGCTGGAGC ATTCCCGCGC GCAGGCGGTG
CTGGTGTCGG GTGCGTTGTT GCCCGCCTTG ACGGCCGCCA TGACCAAGTC GGATCACGAA
GTGGGCAAGG TCATCGTGTC ACGCCCGGTC GCTCCCTTGC ATCCGGCTGA AGTAGAGTAC
GAGACCTTTG TGCAGGCTCA ATCGCCGCTG CTCAAGCCCG CCGCCACCAG CCCCGACGAC
CCCGGCTTCT GGCTCTATTC GTCCGGCTCC ACCGGTCGCC CCAAAGGCGC GGTGCATTCC
CACGGCAACC CCTACTGGAC GGCCGAGCTC TACGGCAAAG CGGTACTGTC CCTGACCGAA
CGCGACACCT GTTTTTCAGC CGCCAAACTG TTTTTTGCCT ACGGCCTGGG CAATGCGCTG
AGCTTCCCGA TGAGTGTAGG TGCCACCACG ATTTTGATGG CCGAGCGCGC CACGCCCGAT
GCCACCTTCA AACGCTGGCT GGGGCAAGTG GGTGGCGTGA AACCTACCGT GTTCTACGGC
GCCCCCACCG GCTTTGCCGG CATGTTGGCC TCACCGAATC TTCCCGCACG CAGCGACGTG
GCCTTGGCGC TGGTGTCGTC CGCCGGAGAG GCCCTGCCAG CCGAGCTGGG TGAGCGCTTC
AAACGCCACT TTGGCGTGGA CATCGTCGAT GGCATCGGCT CCACCGAGAT GCTGCACATC
TTCCTGTCCA ACACCCCACA GAGGGTGCGT TACGGCACCA CCGGTTGGCC GGTGCCCGGC
TACGACATTG AACTGCGTGG TGAGGATGGC GCGGCCGTGC CCGACGGCGA GCCCGGTGAC
CTCTACATCC ACGGCCCTTC GGCGGCCATG ATGTACTGGG GCAACCGCGC CAAGACCCGC
GAAACCTTTC AGGGCGGCTG GACCAAGAGC GGCGACAAAT ACGTTCGCAA CAGCGATGGC
AGCTACACCT ATGGCGGCCG CAGCGACGAC ATGCTCAAGG TCAGCGGTAT CTATGTGTCG
CCGTTTGAGG TCGAGGCCAC ACTGGTGCAG CATCCGTCCG TGCTGGAAGC CGCCGTCATC
GGTGTGCCCG ATGCCCAGGG TCTGACCAAG ACCAAGGCCT TTGTGGTGCT CAAGGCCGGG
GCGCAGGCCA CCGAGGCCGA GCTGCAGGCT TTTGTCAAGG ACAAGCTGGC TCCCTACAAA
TACCCGCGCC AGATCGCCTT TGTGGACGAC CTGCCGAAAA CCGCCACCGG CAAGATCCAG
CGCTTCAAGC TGCGTGAACT GGAAGCCCAC GCCGCATGA
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| Protein sequence | MNASTTTDMP AVTPPGDSFN FAQHLLSCNS QRASKVAFID DQGALSYGQL NERVRRVAAG
LRSLGIKREE RVLLLMHDCN DWPVSFLGAM YAGIVPVAVN TLLTADDYAY MLEHSRAQAV
LVSGALLPAL TAAMTKSDHE VGKVIVSRPV APLHPAEVEY ETFVQAQSPL LKPAATSPDD
PGFWLYSSGS TGRPKGAVHS HGNPYWTAEL YGKAVLSLTE RDTCFSAAKL FFAYGLGNAL
SFPMSVGATT ILMAERATPD ATFKRWLGQV GGVKPTVFYG APTGFAGMLA SPNLPARSDV
ALALVSSAGE ALPAELGERF KRHFGVDIVD GIGSTEMLHI FLSNTPQRVR YGTTGWPVPG
YDIELRGEDG AAVPDGEPGD LYIHGPSAAM MYWGNRAKTR ETFQGGWTKS GDKYVRNSDG
SYTYGGRSDD MLKVSGIYVS PFEVEATLVQ HPSVLEAAVI GVPDAQGLTK TKAFVVLKAG
AQATEAELQA FVKDKLAPYK YPRQIAFVDD LPKTATGKIQ RFKLRELEAH AA
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