Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0172 |
Symbol | |
ID | 3960174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 175009 |
End bp | 175545 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637915008 |
Product | hypothetical protein |
Protein accession | YP_521462 |
Protein GI | 89898991 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAGGC TTTTAATGTT GGCGCTCAAG CCGCCCTTCG AGCGCGTGGC GGCCAGACAC CGCGGGCTCC TTTACGGCGC TGCCTTCGTG TCGGCCCTGT TGCTGGCCGG CTGTGCCGTG GAAGTGGAGA ACAGGCAGGC GGCCCAGGAG GTCGCCCGGC TCTCCAAGCC ACCGGGCTCT GTCTATATCG GCTGGCGCGT CTTCCAGGGC CGGTGCGCGC TCTGCCATGG CTTTGTGGCG ACCGGTACCG CGGGCGCTCC CGATCTGTTG CCCATCGTTC GTGAAATGGG CGCGCACCAA TTCGTGAGCC TCGTGCTCAA GCGCTATGAC TGGAATCTTC CGGCGGCGCA GGCCGGCAGC GAGGGCGCTG CGCGGGAAGC CTTGGTCGAA GATATCGTGC AGCGCAAGGA GCAATACATG CTCACGATGC CGGCATGGCA AGGCGAACCC GTCGCGAGCG CCCATATCAT GGATCTCTAT GCCTATCTCT CGGCGCGCGC CCAGGGCACG CAGGGCCCGG GTCGTCCGGC GCAGTAG
|
Protein sequence | MARLLMLALK PPFERVAARH RGLLYGAAFV SALLLAGCAV EVENRQAAQE VARLSKPPGS VYIGWRVFQG RCALCHGFVA TGTAGAPDLL PIVREMGAHQ FVSLVLKRYD WNLPAAQAGS EGAAREALVE DIVQRKEQYM LTMPAWQGEP VASAHIMDLY AYLSARAQGT QGPGRPAQ
|
| |