| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0166 |
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| Symbol | |
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| ID | 3960168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 165970 |
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| End bp | 167193 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915002 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_521456 |
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| Protein GI | 89898985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACC ACGAACAACT CGACGCCTGG ATTGACACGC ACTTTGACGA GCAGGTGAAG
TTCCTGCAGC AACTCATTCA GGTTCCCACC GATACCCCTC CAGGCAACAA CACACCACAC
GCCGAGCGCG CTGCCGACTT GCTGGACGCC ATGGGACTGA CAACCGAGCG CCACGCCGTT
CCCCACGAGT TGGTCAAGGC CGCCGGTCTG CAAACCATTA CCAATCTGGT CGTGCGCCGC
CAATACGGCG TAGGTCGCAC CATTGCGCTC AACGCCCACG GCGATGTAGT GCCTCCCGGT
GAAGGCTGGG TGCACGGCCC CTACGGGGGT GAGATTGAAA ACGGAAAAAT TTACGGCCGC
GCGGCGGCGG TGAGCAAGTG CGACTTCTCC ACTTACGCCT TTGCCGTGCG TGCGCTGGAA
TCGCTGGGCA TTGCCCTGCA TGGCAATGTG GAGCTGCTGT TTACCTACGA CGAAGAGTTT
GGTGGTGAAG TGGGCCCGGC CTGGTTGCTG CAAAACAAGC TCACAAAGCC CGACCTGATG
ATTGCCGCGG GTTTCAGCTA CCAAGTGGTG ACTGCACACA ACGGTTGCCT CCAAATGCAA
GTCACGGTAC ACGGCAAGAT GGCGCACGCG GCCATTCCCG AAACCGGCAT TGACGCGCTG
CAAGGTGCCA ACAAGATCCT GACCGCGCTG TATGCGCAAA ACACGCTGTA TGAGCAGATC
ACTTCAAACG TGGCAGGTAT CAAGCACCCC TACCTGAACG TCGGCAGCAT TGAAGGCGGC
ACGAACACCA ATGTGGTGCC CGCACGTGTG ACTCTCAAGC TCGACCGCCG CATGATCCCC
GAGGAAACCC CGGCAGAAGT GGAAGCCAAT ATTCGCCAGG TAATTGCCGA TGCCGCAGCG
CTAACCCCAG GCATTACCGT GGAGGTAAAG CGCATTCTGC TGGCCAATGC ATTGAAGCCG
CTGCCGGGAA ACAAGCCGCT GGTGCAAGTC CTGCAAAAGC ATGCCAGCGA GGTGTTTGGC
GAAACCATCC CCGTGCTGGG CACGCCGCTC TATACCGATG TGCGGATCTT CTGCGAGGCT
GGCATTCCCG GCGTCATTTA TGGCGCCGGC CCGCGCACGG TGCTGGAATC CAACGCCAAG
CGTGCCGATG AAAACCTCGA TTTGCAGGAC CTGCGCCGCG CCACCAAGGT CATCGCACGC
AGCCTGCTGG ATTTGCTGAG CTAA
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| Protein sequence | MNHHEQLDAW IDTHFDEQVK FLQQLIQVPT DTPPGNNTPH AERAADLLDA MGLTTERHAV
PHELVKAAGL QTITNLVVRR QYGVGRTIAL NAHGDVVPPG EGWVHGPYGG EIENGKIYGR
AAAVSKCDFS TYAFAVRALE SLGIALHGNV ELLFTYDEEF GGEVGPAWLL QNKLTKPDLM
IAAGFSYQVV TAHNGCLQMQ VTVHGKMAHA AIPETGIDAL QGANKILTAL YAQNTLYEQI
TSNVAGIKHP YLNVGSIEGG TNTNVVPARV TLKLDRRMIP EETPAEVEAN IRQVIADAAA
LTPGITVEVK RILLANALKP LPGNKPLVQV LQKHASEVFG ETIPVLGTPL YTDVRIFCEA
GIPGVIYGAG PRTVLESNAK RADENLDLQD LRRATKVIAR SLLDLLS
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