| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0159 |
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| Symbol | |
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| ID | 3960161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 158865 |
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| End bp | 160097 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637914995 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_521449 |
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| Protein GI | 89898978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAC TTGCAAAACA CCCGTTCACT CTGCTGCCCA ATGCTCGCTT CCAGCAAGCC
GAGCCCTATG GCGCACATCG CAGCACCCTA CTCAGCGCAA GCGCCCTGGC GCAAGCGCAG
ACCGTCATCA CTTCATGGCC GGGTTACACC GTGACCCGCC TGTGCTCGCT GCCTGTGCTT
GCCCGCACGG CAGGCGTGGC CAGCATCCAC TACAAGGACG AAGCTACCCG CTTTGGCCTG
GGCAGCTTCA AAGGGCTGGG CGGGGCCTAT GCCGTGGCGC GCCTGCTGTG CCGTGAGCTG
GGCCAGCGCC TGGGCCGCCC GGTGAGCCAT GCCGATCTGC AGAGTGACCC CGCGCTGCGC
CAGGCCTGCG GCGACATCAC CGTCACCTGC GCCACCGACG GCAACCATGG CCGCTCGGTG
GCCTGGGGCG CGCAGATGCT GGGCTGCCGC TGCGTCATCT ACATCCACGC CACCGTGAGC
GAGGGGCGCA AGGACGCGAT TGCCCGCTAC GGCGCGCAGG TGGTGCGCAC CGCGGGCAAT
TACGACGACT CGGTGCAGCA GGCCGACCGC GACGCAAAAA CCAATGGCTG GTTTGTGATC
TCTGACACCT CCTACCCCGG TTACATGGAC ATTCCCCGCG ACGTGATGCA GGGCTACCAG
TTGATGGTGC ACGAGGCGGT GAGCGCCCTG CCGCAGTGGC CTACGCACGT GTTTGTGCAA
GCCGGCGTCG GCGGTTTTGC GGCGGCGGTC TGCGCCTATT TCTGGGAACG CAGCGCCGAG
CAGCGCCCGG TGTTCGTGGT GGTGGAGCCC GAGCGGGCCG ACTGCCTGCT ACAAAGCGCG
CGCGCCGGTG CCGTGGTCGC TGTCAAGGGC GACCTGGACA CACTGATGGC CGGCCTGGCC
TGCGGCGAAG TCTCGCTGCT GGCTTGGGAC ATTCTGGCCA CCGGTGCCAA CGCCTTTTGC
ACCATCCCCG ATGCCGCCGC CGTGGACACC ATGCGCCTGC TGGCCAGCCC GCAGGGCGGT
GACCCGGTCA TCGTCGCCGG TGAGTCCGCC GTGGCGGGCC TGGCCGCGGC CCTGCTCGCC
GCGCACGACA GCACTGCCCG CGCGTCACTC GGCCTGGGGG TAGAGAGCCG CGTGCTGCTG
TTTGGCAGCG AGGGCGATAC CGACCCCGCC CTGTACCAGC AACTGGTGGG CCGCAGTGCA
GCCCAGGTGC TGCAGGATGG GGCCTCTGTA TGA
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| Protein sequence | MPQLAKHPFT LLPNARFQQA EPYGAHRSTL LSASALAQAQ TVITSWPGYT VTRLCSLPVL
ARTAGVASIH YKDEATRFGL GSFKGLGGAY AVARLLCREL GQRLGRPVSH ADLQSDPALR
QACGDITVTC ATDGNHGRSV AWGAQMLGCR CVIYIHATVS EGRKDAIARY GAQVVRTAGN
YDDSVQQADR DAKTNGWFVI SDTSYPGYMD IPRDVMQGYQ LMVHEAVSAL PQWPTHVFVQ
AGVGGFAAAV CAYFWERSAE QRPVFVVVEP ERADCLLQSA RAGAVVAVKG DLDTLMAGLA
CGEVSLLAWD ILATGANAFC TIPDAAAVDT MRLLASPQGG DPVIVAGESA VAGLAAALLA
AHDSTARASL GLGVESRVLL FGSEGDTDPA LYQQLVGRSA AQVLQDGASV
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