Gene Rfer_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0154 
Symbol 
ID3960563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp153968 
End bp154474 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content55% 
IMG OID637914991 
ProductDinB 
Protein accessionYP_521445 
Protein GI89898974 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAGA AAATTCTCTC ATCCCTTTTC GCTCAGAAGT CTTGGGCCAA TCGCGAACTG 
TTTGACGTAT TGGCCTCGAT GACGTCCACG GATCAAGCGG CTTCGTTGCA CACGGCGATC
AGGACGCTCA ACCACATCTA CGTTGTCGAT CGAATCTTTC GCGCCCACTT GGCTGGCGAG
AAGCACCCGT ACACGGCGAC GAATACGCCA GAGACACCCG CACTTGGTGA GCTTCATATC
GCTGTCGCCG AAACCGACCT CTGGTTCGAA GACTATGCCT CCAAGATCAC TGGCCAAGCA
CTGGCGGAGA GTCTTTCATT TCAGTTCACG GATGGTGACT CGGGAAGCAT GACGCGAGAG
GAAATGCTGT TCCATGTGCT CACCCACGGG TCTTACCATC GCGGCAACGT TGGCCAAATA
CTCAAAGGCA TCTCGGTCGC GCCACCGCGT GATTTGTACA CCAAGTTCTT GCATGTCCAC
GAGCCAGCAC GCCGGGAGGC CGAATAA
 
Protein sequence
MSQKILSSLF AQKSWANREL FDVLASMTST DQAASLHTAI RTLNHIYVVD RIFRAHLAGE 
KHPYTATNTP ETPALGELHI AVAETDLWFE DYASKITGQA LAESLSFQFT DGDSGSMTRE
EMLFHVLTHG SYHRGNVGQI LKGISVAPPR DLYTKFLHVH EPARREAE