| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0143 |
|---|
| Symbol | |
|---|
| ID | 3960552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 145866 |
|---|
| End bp | 147050 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637914980 |
|---|
| Product | phosphonate metabolism |
|---|
| Protein accession | YP_521434 |
|---|
| Protein GI | 89898963 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3626] Uncharacterized enzyme of phosphonate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0020256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTTG CAGTAAAAGG CGGCGCCGCC GCGATTGAAA GTTCCTGGCG CCTGCTGGAG
GCCCAGCGCC GGGGCGACAC CGCCATTGCC GAGTTGTCGG TGGCGCAGAT CCGCGCGCAG
CTCTCGCTGG CGGTGGACCG GGTCATGAGC GAAGGCTCGC TGTACGACCC CGAACTGGCG
GCGCTGGCCA TCAAGCAGGC CAGCGGCGAC CTGATGGAAG CGATCTTCCT GCTGCGCGCC
TACCGCACCA CCTTGCCGCG CCTGGGTTAC AGCGAGCCGC TGGACACCGC GCGCATTGCG
CTGGTGCGGC GCATCTCGGC CACGTTCAAG GAGGTGCCGG GCGGCCAGCT GCTGGGGCCG
ACCTACGACT ACACCCAGCG CCTGCTGGAC TTTGCCTTGC TGGCCGAAGG CGAAAACACC
GGCCACTCGC CCGCTGCCAG CGACACCGCG CCGGACTGCC TTGCCAAGGC GTTCACAGAC
CCGTTGGAAA AGTACCTCGC CATTGAGACG CCATCGGCCA CCGTGCCCCG CATCAACGAG
CTGCTGGCGC GCGAGGGCCT GCTGGAAACA CCGCAACCGT TTGACGCCGC CCCACCGGGC
GACCTGACCC GTGATCCCTT GATGTTCCCC GCCGACCGCG CCCTGCGCCT GCAGGCGCTG
GCGCGTGGTG ACGAAGGCTG GCTGCTGGCC ATGGGCTACT CGACCCAGCG CGGCTACGCC
AACTCACACC CGTTTGCCGG CGAAATCCGG CGTGGCTTTG TCAGTGTGGA ACTGGTGCCG
GATGAGCTGG GTTTTGCCCT CGACATTGGT GAGCTAGAGA TCACCGAGTG CCAGATGATC
AACCAGTTCA GCGGCAGCCG CGAGGTGCCG CCGCAGTTCA CCCAGGGTTA CGGCCTGGCT
TTTGGCGGTG CCGAGCGCAA GGCCATGGCC ATGGCGCTGG TGGACCGGGC CCTGCGCGCC
GACGAACTGG GCGAGCCGCG CGTGGCCCCG GCGCAGGACG AGGAGTTTGT GCTGTCACAC
GCCGACAACG TCGAGGCATC CGGTTTTGTG CAGCACCTCA AATTGCCACA CTACGTGGAC
TTTCAGGCCG AACTGGAGCT GGTGCGCAAG CTGCGCGCCG CCCATGCCGC GCCGGCACGT
GACAGCGCCA GCGCTTTCAA CCCCACCCAG CAAGAGGCGG CATGA
|
|---|
| Protein sequence | MYVAVKGGAA AIESSWRLLE AQRRGDTAIA ELSVAQIRAQ LSLAVDRVMS EGSLYDPELA
ALAIKQASGD LMEAIFLLRA YRTTLPRLGY SEPLDTARIA LVRRISATFK EVPGGQLLGP
TYDYTQRLLD FALLAEGENT GHSPAASDTA PDCLAKAFTD PLEKYLAIET PSATVPRINE
LLAREGLLET PQPFDAAPPG DLTRDPLMFP ADRALRLQAL ARGDEGWLLA MGYSTQRGYA
NSHPFAGEIR RGFVSVELVP DELGFALDIG ELEITECQMI NQFSGSREVP PQFTQGYGLA
FGGAERKAMA MALVDRALRA DELGEPRVAP AQDEEFVLSH ADNVEASGFV QHLKLPHYVD
FQAELELVRK LRAAHAAPAR DSASAFNPTQ QEAA
|
|---|
| |