| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0059 |
|---|
| Symbol | |
|---|
| ID | 3960314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 61322 |
|---|
| End bp | 62839 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637914898 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_521352 |
|---|
| Protein GI | 89898881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.811122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAA TCGGTCGATT TGCAGCCCCA ATGGGATGGG CAATTGCCTG TCTGCTGTCG
CTGTCCCTTG CCGTCCCGGC ATTCGCTGTT AATCAAACGG CCGCCAAAAA AGTCGGCGCC
GATCAGATGA TCAAAAAGTC GCCAGCCGAT GCGGCGATCG GGAAAAAATG CATCAGTTGC
CACGGCGCCG AGGACGATCC GGGCATCTAC GGCGAGTGGA AGAAGAGTAG CCACGCCGCC
AAGAATGTGG ACTGTTACGA CTGCCACAAG GCCAAGCAAG GCGAGAAAGC CGCCTTCGCG
CACCATGGCG CCTCTATTCA GGTGATCGTC ACCCCCAACA CCTGCGCCAA TTGCCATGCC
GCCGAGGTGG CGCAGCAGCA GCGTTCGCAC CACGCCAAGG CCGGCAATAT TCTGGCCTCG
CTGGACAATC TGCTGGGCGA GGTGATTGGT GGACCGGCCG CCGTCAATGC CGGCTGTCTG
CAATGTCATG GCAGCACCGT GGTTCTCGAC GACAAGGGGC GTCCGACGCC GCAAACCTGG
CCCAATACCG GCATTGGCCG CATCAATCCG GACGGCTCAT TGGGATCTTG TTCGGCCTGC
CACGCCCGCC ATAGTTTCTC GTCGGCGCAG GCGCGCACCC CCGACACCTG TGGCAAATGT
CATTTGGGGC CGGATCATCC GCAACTCGAA ATCTATAACG AGTCCAAACA TGGCATTCTC
TACCGCGCCA AGATCAAGGA AATGAACCTG GATTCCAAGA AATGGGTGGT GGGCGCTGAC
TACACAGCGG CGCCGACTTG TGCCACCTGC CACATGAGCG CCACCCGCGA GCAGAAGGTC
ACGCACGACG TGGGTGAGCG TATTTCCTGG ACCCTGCGGC CTGCCATCTC CACCAAACTC
AACATGATTC GCCTGAGCAC CGGCGATGAA TTCGATCAAC CAGAGGGCCA GCCCTTGCCC
AAAGTGGGTG ACGAGGTCAA AGGCGCCAAA GTGACCGAAA TCCTGACCTG GACGCAACGC
CGGGACAAGA TGAAGGACGT CTGCGTCGCC TGCCACAGCG CCAATACGGT GGCGGGCCAA
TACAAGCAGT TTGATGACCT GGTCGAGCTT TACAACGACA AATATGCCAA GCCGATTGCG
GCTGTCATGA AGGAACTCGA AGACAAGGGC TACCTGACGC ACCAACCCAT GGACGCAAAA
ATCAAGTGGA CCTGGTTCGA GATCTGGCAT CACGAAGGCC GCCGCGCCCG TCACGGTGCT
GCCATGAACG GGCCGGACTA CACCTGGTGG CATGGCATTT ACGAAGTCAG TCAACACACC
TATTTCAAGT GGATTCCCGA ACTGAAAGAG GTGGTTCGCC AGAAAGACGG CAACGAAGAT
TTCGCCAATG CACTGCTGGA CAAGCATTTC AAACCGATTG CCGGCCATGA CTGGTTCTTC
AACGGCATGG GCAAGGATGC GATTGAAAAA GTGCGCAAGG GCTATGACGA GCGCTATGGC
AAAGGCGCCT TGAAATAA
|
|---|
| Protein sequence | MRRIGRFAAP MGWAIACLLS LSLAVPAFAV NQTAAKKVGA DQMIKKSPAD AAIGKKCISC
HGAEDDPGIY GEWKKSSHAA KNVDCYDCHK AKQGEKAAFA HHGASIQVIV TPNTCANCHA
AEVAQQQRSH HAKAGNILAS LDNLLGEVIG GPAAVNAGCL QCHGSTVVLD DKGRPTPQTW
PNTGIGRINP DGSLGSCSAC HARHSFSSAQ ARTPDTCGKC HLGPDHPQLE IYNESKHGIL
YRAKIKEMNL DSKKWVVGAD YTAAPTCATC HMSATREQKV THDVGERISW TLRPAISTKL
NMIRLSTGDE FDQPEGQPLP KVGDEVKGAK VTEILTWTQR RDKMKDVCVA CHSANTVAGQ
YKQFDDLVEL YNDKYAKPIA AVMKELEDKG YLTHQPMDAK IKWTWFEIWH HEGRRARHGA
AMNGPDYTWW HGIYEVSQHT YFKWIPELKE VVRQKDGNED FANALLDKHF KPIAGHDWFF
NGMGKDAIEK VRKGYDERYG KGALK
|
|---|
| |