Gene Rfer_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4379 
Symbol 
ID3959916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007901 
Strand- 
Start bp143560 
End bp144132 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content56% 
IMG OID637909587 
ProductERCC4 
Protein accessionYP_516063 
Protein GI89885865 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTGC GTGCCGTACC ACCCACAACC AGTCGGCTGA TTGTCAAACG TGGCGGTAGC 
GCCATCACAA GCAAAATCCC TAAACCGGTG GTGCTGGTCG ACACACGAGA GCAGCAGCCG 
TTCACATTTG AGCGGTTCCC AAATTGGATC GCCAGCGAGC GCCGGACAAC CCTGCCCACC 
GGGGACTACA GCATCCTTGA CATGGAGCAT CTGGTGGCGC TGGAACGCAA ATCACTCCCG 
GACCTGATTG GCACCTTGAT GCACAACCGT CAGCGTTTTT TTCGGGAATG TGAGCGTTTG 
ACCACATTCC GCTGGCGCGC GTTGCTGGTC GAAGCGTCCT ACCACGACGT CAAGTCGCCC 
TATGTCAATT GCGAATACAC ATCAGCCGCC CCGAACGGGG TCAGCGGCAC GCTCGATGCC 
CTGGAAGTTA AATTTGGCAT ACCCGTCATC TACGCATCAA AACACCGCGC ATTGGCGGAG 
GAAAAAACAG CTTCCTGGCT CAGCAAGCTG TACACGTACT GGTGGCTTGA AGAAAATGGC 
ATGGGGCGCG TTCTGCAGGA AGGCGATTTA TAG
 
Protein sequence
MTLRAVPPTT SRLIVKRGGS AITSKIPKPV VLVDTREQQP FTFERFPNWI ASERRTTLPT 
GDYSILDMEH LVALERKSLP DLIGTLMHNR QRFFRECERL TTFRWRALLV EASYHDVKSP 
YVNCEYTSAA PNGVSGTLDA LEVKFGIPVI YASKHRALAE EKTASWLSKL YTYWWLEENG 
MGRVLQEGDL