| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4284 |
|---|
| Symbol | |
|---|
| ID | 3959820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007901 |
|---|
| Strand | - |
|---|
| Start bp | 41369 |
|---|
| End bp | 42421 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637909492 |
|---|
| Product | parB-like partition proteins |
|---|
| Protein accession | YP_515969 |
|---|
| Protein GI | 89885771 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC AAAAAATCAA ACCTAGCTCG CTGATTCTTC GTGATGGGGC GGCGGATCAA
CTTCGCTCCA TGATGGCTCA GCAGCCCTCT GCACAGGCTT ATGAACCGGT TCATAAGGCA
CCAACACTGT CCGAAAACAT TGGGATATAC GTCGTTGGCA AGCCGTATGA AGTACCTTTG
TCAGAAATAC GCGAAAACCA CCTTAACGCC AGAGCCTATT ACACCAATTC AGAAGTGGAG
TTGATGGGCA AGAGCATGCT GGAAAATGGA CAAGAAGTGC CGGCGCGTGG TTACTTGGAG
GACGGACTCG TCTACCTGAT CGATGGTCAA AAGCGCTGGC GCGGCGCTAA TGCGTTCGGC
ATCACGACAC TTCGTGTCGA GATCTGCGTC AAACCCCAGT CCGAAAAAGA AGCCTATCTT
GAATCGCGCC GCATCAACGT TGAACGCAGT GACCAGACGG TGATGGATGA CGCGATTCGG
TTTAAATACT TACTCGACAA CAAGGTGTTT TTAAGTCAGG TTGAACTGGG TCTGTCGATA
GGGGTTGACC AGGCAATAGT CTCTAAAATT TTGTCGATCA ACGCCATACC GGATCGCATC
AAAAGGCGCA TGTTGGATTA CCCACAGTTG ACACAGTTGC GTGTTGCTTG TGCAATCAGC
AAAATATTCA GTCCCAATGA GCAACCGAAA GATGCTGCGG CGGCACCTGC TAGTTCGGGC
GACTTGAACT CTGCAGAACC TGAGCTGGAT TCGGAAAAAG TTGAGCCAGT CGATCTTTGC
GCATTGGCAG ACAATCTCAT CGATGACATA AATCGCTCTG AGATGTCAGC TCGACAAGTC
GAAGACTTGG TGGCATCGCT GCTTTCGCCA AGAAAAAAGA AGAAAAAGAT CCGTTCTGAG
ATTCGAAATT ACCTGTTTGC AGGCAAACCC GTAACGCTGA AAGTATTGGT CAGCAAAGGT
AATCTCGAAC TTTCCGTCAA GGGATTGACC TCCGACAAAC TCGAACTCCT TCATGAAAAA
CTGCAAGAGG TACTTAAGGC TGACCCCGTA TGA
|
|---|
| Protein sequence | MSKQKIKPSS LILRDGAADQ LRSMMAQQPS AQAYEPVHKA PTLSENIGIY VVGKPYEVPL
SEIRENHLNA RAYYTNSEVE LMGKSMLENG QEVPARGYLE DGLVYLIDGQ KRWRGANAFG
ITTLRVEICV KPQSEKEAYL ESRRINVERS DQTVMDDAIR FKYLLDNKVF LSQVELGLSI
GVDQAIVSKI LSINAIPDRI KRRMLDYPQL TQLRVACAIS KIFSPNEQPK DAAAAPASSG
DLNSAEPELD SEKVEPVDLC ALADNLIDDI NRSEMSARQV EDLVASLLSP RKKKKKIRSE
IRNYLFAGKP VTLKVLVSKG NLELSVKGLT SDKLELLHEK LQEVLKADPV
|
|---|
| |