| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4187 |
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| Symbol | |
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| ID | 3936676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4297776 |
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| End bp | 4298546 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637906573 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_512129 |
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| Protein GI | 89056678 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC TGTTGGCCCA GCTTCTTGAT CTTTCGGAGA TCTGGCTTGC AACTGGTATC
GCTGTTTTTC TACGGGTCGG TGCCTGTTTT CTTGTGCTTC CGGGCCTCGG AGAGCAGATG
ATCCCCGTCC GCGTTCGACT GGGTGCGGCA CTCGCATTTA CCGTCTTCCT GACGCCCGCT
ATGCAGCCGG TGCTTTCTGT GAGCGCCGTC ATTCCCCCTC TTACAGCATT CTTTTCAGAA
GCAATTGCAG GCCTGATCAT CGGTATGGCG CTGCGATATT TGGTCCATGC CTTGCAGGTC
GCGGGGACCA TCGCGGCGCA ATCCACATCT CTCAGCCAGA TCCTAGGGGG CGCCACACCG
GATCCTCTGC CAGCCATGGG CGCCATCCTA ATGCTAGGCG GGCTTACCTT AGCAGTCATT
TCCGGCCTTC ACGTCCACCT GGTCCAAACA TTCCTCCACT CCTACGACGT CCTGCCGTTC
GGAAACCTTC CCGGGCCACG CGACCTTGCG GGTTGGAGTG TGGACCAGGT CAGCGCGAGT
TTTTCGCTCG CTGTGTCTCT CGCCGCGCCG TTTTTGGTTG CATCACTTCT CTACAATGTC
GCCCTAGGCG TGATTAATAA AGCGATGCCA CAACTGATGG TCGCATTCGT TGGCGCGCCT
GCCATCACGT GGGGTGGGCT GTTTCTCTTG CTGATAACAA CGCCCTTCAT CCTTCCCGTC
TGGCTACATG CTTTTGAGGG AGCTCTCGCC TCTCCACTTG GGGGGCGATA A
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| Protein sequence | MIDLLAQLLD LSEIWLATGI AVFLRVGACF LVLPGLGEQM IPVRVRLGAA LAFTVFLTPA
MQPVLSVSAV IPPLTAFFSE AIAGLIIGMA LRYLVHALQV AGTIAAQSTS LSQILGGATP
DPLPAMGAIL MLGGLTLAVI SGLHVHLVQT FLHSYDVLPF GNLPGPRDLA GWSVDQVSAS
FSLAVSLAAP FLVASLLYNV ALGVINKAMP QLMVAFVGAP AITWGGLFLL LITTPFILPV
WLHAFEGALA SPLGGR
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