| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4140 |
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| Symbol | |
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| ID | 3936629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4250362 |
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| End bp | 4251021 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906526 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_512082 |
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| Protein GI | 89056631 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00242001 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGC ATCCCGCGGC CACCGTCGGC ACCAGCACCT ATCAAAAGAT CAAGCGGGAT
ATCCTGTTCG GGGCGCTGCA GCCCGGTGCG AAGTTGAAGC TGGACACGTT GAAGCAAAAC
TACAATGCCA GCCTGTCTAC ATTGCGCGAA ACGCTGAACC GGCTGGCCAG CGAAGGTTTC
GTCGATGCCC CTGAACAGCG GGGGTTCTTT GTCAAACCCG TGTCTGCAGA TGATTTGCGC
GAGATAGCGC AGCTTCGGGT GCTTTTGGAA TGCCACGCCC TGCGCCTGTC GATTGCACAT
GGCGATACAG AGTGGGAGGG CAATCTGGTC GCAGCCCACC ACAAGTTGCA CGTCATGGAA
CTGCGTCTGC TGCAGGGCGA CGAATCCGAG AAAGAGGCGT GGAAGCGCTA TGATTGGGAG
TTTCATCAGG CGCTGATATC AGCGTGCCAG TCCGCAAACC TGCTGTCGCT ACATGCGACG
CTTTACGACA AATACCTGCG CTACCAGATG CTGGTCTTGA CCCATCGGGG GCAGGAGGCC
GTTGAAGAGC ATCGCGTGAT GTTCGATGCG GCCCTCGCCC GCGATGCCGA TGGCGCCGCA
ATCGCGCTGG AGACGCATAT CATCAGAGGG TTGGAGCACA CGGCCGAGGC GATGGCGTAG
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| Protein sequence | MMTHPAATVG TSTYQKIKRD ILFGALQPGA KLKLDTLKQN YNASLSTLRE TLNRLASEGF
VDAPEQRGFF VKPVSADDLR EIAQLRVLLE CHALRLSIAH GDTEWEGNLV AAHHKLHVME
LRLLQGDESE KEAWKRYDWE FHQALISACQ SANLLSLHAT LYDKYLRYQM LVLTHRGQEA
VEEHRVMFDA ALARDADGAA IALETHIIRG LEHTAEAMA
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