Gene Jann_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4108 
Symbol 
ID3936597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4215507 
End bp4217180 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content62% 
IMG OID637906494 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_512050 
Protein GI89056599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCT CTATTCCCTT TGATACCTAC CACACCTATG ACGCCATGAC CGCGCATCTT 
CGCGCTTTGG CGGACGCCTA TTCAAAGCTG TGCACCCTGA CGTCCATCGC GAAGTCCCAT
CAAGGCCGCG ACGTGTGGTT CATGACGATC ACCAATCCCG AGACCGGCCC GGCGCTGGAA
AAGCCAGGCT TCTACATCGA TGCGCAGATA CATGCGGAGG AACACGCCAC CAGCGCCACA
GCGCTATACG CCTGCGCCTA TCTGCTGAAC AATTACGGCA CGGATGAAGA GGTCACGCGG
CTGGTGGACG GGCAGGTGTT CTACATCATC CCCCGCATCA ACCCCGATGG CGCGGAGAAT
GCGATGACCG CGCCGTATCA TCCGTGGTGC GGGAACGGAC GCTTTTTGCC CGGGGAGGAT
CGGATCGAGG GGCTGATCCC GCAGGACATC ACAGGCGATG GGTATATTGT TCAGATGCGC
GTGCCCGACA CCAAGGGCGA ATGGAAATGC GACGATGAAA ACCCCGACAT CATGGTGCAG
CGCGAACCGG GGGAAGAAGG CGGCACGTAT TACCGCCTGT ACCCCGAGGG CATGATCCGC
AATTACGACG GCGTGCATAT CCATATCGAG ATGCAGGAAG ACGGCAACAT GAACCGCAAC
TTCCCGACAA ACTGGACGCC GCAGGAATAT GGCGCGGGGG AGTATCCGTT TTCCGAGCCC
GAGACGGCGG GGATGCGCGA TGTCATTCTG GCCCATCCTA ATATCACCGG CATGTGCGCC
TATCACACCC ATGGCGGGAT CATCCTGCGC CCGTCCATGT TGCAAATGGA CAGTGAAATG
AGCCCGCCGG ATCTGTCGCT GTATAAGGCG TTGGGGGAGG TGGGTGAACG CCTGACCGGC
TATCCCACGA TCTCGGTCTA CGAGGAATTC ACACCGGATA AGAGCAAGGC CCGCCACGGC
ACGCTCACCG ACTGGACCTA TGAAGAGATG GGCATCATCT CCTTCGGGAC GGAGCTGTGG
GATCTGGAGC GGACGGCGGG CGTGCCGAAA GAGGGGTACT ACAACCTCGG ACCGCGCGAC
GCGGCGACGC AGCGGTTGGT CCACAATTGG GTGGTGGAGA ATGTGGGCGA CCACGGCTTC
CGCCCCTGGA CGGCGTTTGA CCATCCGCAA CTCGGCCCGG TGGAGGTCGG CGGGATGGTT
TACATCTGGA GCTACCGCAA CCCGCCCGGC AATCTGCTGG AAGAGATCTG CCACAACAAC
GTCCTGTTCA ATCTGCGCCA TGCCGCTGCC GCGCCGCAGG TACTGGTGGA TAACGTGGAG
GTCGAGGCAC TCGGCGCTGA CCTGCACCGC GTCACGGCGG TGGTGTCCAA CCATGGCTAT
CTGCCCACGA ACCTGTCGGA CGTTGCGGTG AAGAACAACG TGGCAAAGCC GGTCGTGCTG
AGCCTTGCCT GCGAGGGTGC GGAGGTCGTG ATGAACCCGG CCTCGGTCGA TCTGGGACAT
CTCGCGGGCC GGAACGAGCG GCGCTATGCC TATTCCAACT GGGGCCAGCA ATGGTCGCCC
GTGTCGAGGA AGGTGGAATG GCTGGTAAGG GGCACCGGGT CGGGCGCGAG CGTGACGGTG
ACCGCGTCGT CGGAGAAGGG CGGGACGCAT CGCGCGAGCA CGACCTTGGG CTAG
 
Protein sequence
MTVSIPFDTY HTYDAMTAHL RALADAYSKL CTLTSIAKSH QGRDVWFMTI TNPETGPALE 
KPGFYIDAQI HAEEHATSAT ALYACAYLLN NYGTDEEVTR LVDGQVFYII PRINPDGAEN
AMTAPYHPWC GNGRFLPGED RIEGLIPQDI TGDGYIVQMR VPDTKGEWKC DDENPDIMVQ
REPGEEGGTY YRLYPEGMIR NYDGVHIHIE MQEDGNMNRN FPTNWTPQEY GAGEYPFSEP
ETAGMRDVIL AHPNITGMCA YHTHGGIILR PSMLQMDSEM SPPDLSLYKA LGEVGERLTG
YPTISVYEEF TPDKSKARHG TLTDWTYEEM GIISFGTELW DLERTAGVPK EGYYNLGPRD
AATQRLVHNW VVENVGDHGF RPWTAFDHPQ LGPVEVGGMV YIWSYRNPPG NLLEEICHNN
VLFNLRHAAA APQVLVDNVE VEALGADLHR VTAVVSNHGY LPTNLSDVAV KNNVAKPVVL
SLACEGAEVV MNPASVDLGH LAGRNERRYA YSNWGQQWSP VSRKVEWLVR GTGSGASVTV
TASSEKGGTH RASTTLG