| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4090 |
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| Symbol | |
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| ID | 3936579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4196676 |
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| End bp | 4197998 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906476 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_512032 |
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| Protein GI | 89056581 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.25614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGAC GGACATTCCT CACGACGGTA TCAGCGGCAG CGATGGTCGC GGCAGCGCCC
AAACTGGCGC TCGCGCAGGA GCTTGCTTAC GGCCTGACCC CCGGACGCCC CTTTGAAGGC
ACGACAATCA ACGTCCTTTC CGTGGTGACA CCGCAATTCG ATGGCCTCCG CCTGCGCGAT
CAGGAATTCA CGGATCTGAC CGGCATCAAC GTGGAATGGA CGTTCATTCC CTTTGGCTCT
CTTCAGGAAC GGGTGAACGC AGAAGGCATC GCGGCCAACG GCGCGTTCGA CGTGGTGAAC
TACCTCGACA GCTGGGGCCC GCCCAACGCC CATTGGCTCA CGCGCATCGA CGACCTGATG
GCGCGCGACG GCATCTCGAT GGATCGCTAT CCGCCAGCCT TTGCGCGCTC GGCCCAATTC
GAAGGCGAGA CGCTCGGCTT CCCCCTGCGT GCCCACGCTC AGCTGATGTT CTACCGCAAG
GACCTGATCG AGACGCCGCC CGCTACGTGG GACGACGTCG TGCGCATCGG TGGCGAACTG
GCCGAGAGCC ATCCGGATAT CGCGCCCCTC GCGCTTTATT ACAACAACGA CGGCAACCGG
CAGAACCTGT TCATCTGGAT CAACTTCCTC TGGGCCGCCG GTGGCGCGAT CTTCAACGAC
GATTTCACCG CCGCGTGGAC GTCGGATGAG GCCATCGCCG CTACCGAGGC CTATATCGGC
CTGCACACGG AAGCGGGCGT CACCAACCCC AACTCCCTGG CCTTCGTGGA ACAAGACGCG
CGGCAGTCGT TCATGCAGGG CAATTCGGCC ATGATCCCGG TGTGGTGGTG GGCCTATTCG
GGCTTCATCA ACCCCGAAAG CTCGACCCTC ACAGCCGATC AGGTGGGTTT CGTGGGCATG
CCGTCCTATG AGGGCACGAC CGCGACCTAC GCGATCTCCA TGCCGTTCTC GATCTCGACC
TACTCGGCAA ATCAGGAAGC GGCTTGGGAA TTCCTCAAGT GGCTGTCGAA CCCCGACATG
GACCGCGCCA ATGCGATCGA GCGGGACGTG GGTGGCGAGA GCATCGTCAA CAACGTGGTG
ACGCATGTGT CCTCGCTGAC GGACCCGGAC GTGAACGCGG CCAATGCGGG CATTCAGGCG
GCCGCTTATG ACAGTCTGGC GAATTCCGAC ATCATGCCGC AAATTCCCGA GTGGCCCGAG
GTCGGTGACA TCCTGTCCGC CGCCATCGCG GAGGCCGCCG CAGGTGGCAA CGTCCGCGAG
CTGATGATGG CCGCCGCAGA GCAATCCGAC CGCGTGCTGC GCCGCGCCGG TCGTATCGAG
TAA
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| Protein sequence | MHRRTFLTTV SAAAMVAAAP KLALAQELAY GLTPGRPFEG TTINVLSVVT PQFDGLRLRD
QEFTDLTGIN VEWTFIPFGS LQERVNAEGI AANGAFDVVN YLDSWGPPNA HWLTRIDDLM
ARDGISMDRY PPAFARSAQF EGETLGFPLR AHAQLMFYRK DLIETPPATW DDVVRIGGEL
AESHPDIAPL ALYYNNDGNR QNLFIWINFL WAAGGAIFND DFTAAWTSDE AIAATEAYIG
LHTEAGVTNP NSLAFVEQDA RQSFMQGNSA MIPVWWWAYS GFINPESSTL TADQVGFVGM
PSYEGTTATY AISMPFSIST YSANQEAAWE FLKWLSNPDM DRANAIERDV GGESIVNNVV
THVSSLTDPD VNAANAGIQA AAYDSLANSD IMPQIPEWPE VGDILSAAIA EAAAGGNVRE
LMMAAAEQSD RVLRRAGRIE
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