Gene Jann_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4083 
Symbol 
ID3936571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4188754 
End bp4190283 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content66% 
IMG OID637906468 
ProductHemY-like 
Protein accessionYP_512025 
Protein GI89056574 
COG category[S] Function unknown 
COG ID[COG3898] Uncharacterized membrane-bound protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.571415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.408221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTTT GGTCGCTGCT GAAAATCATC ATCTTCATCG CCATCGTCGT GGGGGCCGTC 
TTCGGCATCA CCTTGCTGAC GGAGATGGAC AACCTCGGCA TCCTGATCAT CTTCGGGCGG
GAATTCGTGA TCACGCCGCT TCTGGCGGTG ATCGGCGCGG TGATCCTGCT TCTGGCGGTG
TGGATCCTGT TCAAGGTCGT CGGGCTTTTG GTGGCGTTCC TGCGGATGCT GAACGGGGAT
GAAACCGCCC TGACCCGCTA CTGGAGCCGC CGGTCCGAGC GCAAGGGCTA TGACGCCTTG
GGCGACGCGA TGATGGCGTT GGCGGCAGGT GAAGGCCGTC TGGCGATCCG CAAGGCAGAG
CGTGCGCGCA AGGCGCTGGG ACGGCCCGAA CTTACGAATT TGGTGGTGGC TCAAGGGGCC
GAAATGGTCG GCGATAAGGC GCTGGCGACC GAGACCTACA AGGCCATGGT CACCGATGAC
CGCACGCGAT TTGTGGGGGT GCGCGGGCTG ATGCAGCAGC GACTCGATGA CGGCGATACC
GACACGGCCC TGAAACTGGC CGAAAAGGCG CTGGTCCTGC GGCCCAAGAA CGCCGATGTG
CAGACAACGC TGATCTCTTT GCAGTCCCGT CAGGAAGACT GGCAGGGTGC CCGTGGCACG
CTGGCGGCTG CCCTGAAAGC AGGCAATGTG CCCCGCGATC TGCACCGCCG CCGCGACGCC
GTTCTGGCCC TGGCCCATGC CCGCGACGCC ATGGCGGAGG GACAGGTCGT GACCGCCACC
CGCGATGTGG CCGAGGCCAA CAGGCTTGCG CCGGGTCTTG TGCCAGCCGC CGTGATGTCC
ACGCGCCTTG CGGTGGAGGC GGGCAACAAA CGCCAGGCCG CAAAGACGAT CCGCAAGGCC
TGGGATCAAG CGCCGCATCC GGATCTGGCC GCCGCGTTCG CGCTGATTGA ACCCGATGAG
ACGCCTGCCC TGCGCCTGCG CCGCTTCCGT CCGCTTCTGG GCAAGCACCC GACCCACCCC
GAGGTGAAGA TGCTGGAGGC CGAGCTGCAC ATCGCCAACG AGGATTTCCC CGCCGCCCGC
AAGGCCTTGG GTGATCTGGC AGAAAGTGCG CCCACCGCGC GGTCGTTGAC GATCATGGCT
GCCGTCGAGC GGGGCGAAGG CTCCCCGGAC CGCATCGTGC GCGGCTGGCT GGCCCGCGCC
GTCACTGCGC CCCGGGGCAA CCAGTGGCTC TGCGACAACT GCGGTCATGT GCATGAGGAT
TGGACGCCGG TCTGCGTCAA TTGCGAGAGT TTCGACACGC TGGACTGGGC CGAGCCGCGT
CAGTCGGAAA CCTCCCTCGC GGGTCCCACC CAGATGCTGC CCCTGATCGT GGGCGCACTG
GAGGATCAAA GCGATGCGCC CGAGGCAGCG CCCGAGGCAG GGCCTGACGC GGAAGAGGAG
GCCGAGATAC TCGACGACAC ACCCGCCGAG CCCGAAGCGG CCCAAGTCAC GCCGGATCCC
ACGCCAGAGG CCGAGGTTTC ACGAAAGTAG
 
Protein sequence
MLLWSLLKII IFIAIVVGAV FGITLLTEMD NLGILIIFGR EFVITPLLAV IGAVILLLAV 
WILFKVVGLL VAFLRMLNGD ETALTRYWSR RSERKGYDAL GDAMMALAAG EGRLAIRKAE
RARKALGRPE LTNLVVAQGA EMVGDKALAT ETYKAMVTDD RTRFVGVRGL MQQRLDDGDT
DTALKLAEKA LVLRPKNADV QTTLISLQSR QEDWQGARGT LAAALKAGNV PRDLHRRRDA
VLALAHARDA MAEGQVVTAT RDVAEANRLA PGLVPAAVMS TRLAVEAGNK RQAAKTIRKA
WDQAPHPDLA AAFALIEPDE TPALRLRRFR PLLGKHPTHP EVKMLEAELH IANEDFPAAR
KALGDLAESA PTARSLTIMA AVERGEGSPD RIVRGWLARA VTAPRGNQWL CDNCGHVHED
WTPVCVNCES FDTLDWAEPR QSETSLAGPT QMLPLIVGAL EDQSDAPEAA PEAGPDAEEE
AEILDDTPAE PEAAQVTPDP TPEAEVSRK