Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4083 |
Symbol | |
ID | 3936571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4188754 |
End bp | 4190283 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637906468 |
Product | HemY-like |
Protein accession | YP_512025 |
Protein GI | 89056574 |
COG category | [S] Function unknown |
COG ID | [COG3898] Uncharacterized membrane-bound protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.571415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.408221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTACTTT GGTCGCTGCT GAAAATCATC ATCTTCATCG CCATCGTCGT GGGGGCCGTC TTCGGCATCA CCTTGCTGAC GGAGATGGAC AACCTCGGCA TCCTGATCAT CTTCGGGCGG GAATTCGTGA TCACGCCGCT TCTGGCGGTG ATCGGCGCGG TGATCCTGCT TCTGGCGGTG TGGATCCTGT TCAAGGTCGT CGGGCTTTTG GTGGCGTTCC TGCGGATGCT GAACGGGGAT GAAACCGCCC TGACCCGCTA CTGGAGCCGC CGGTCCGAGC GCAAGGGCTA TGACGCCTTG GGCGACGCGA TGATGGCGTT GGCGGCAGGT GAAGGCCGTC TGGCGATCCG CAAGGCAGAG CGTGCGCGCA AGGCGCTGGG ACGGCCCGAA CTTACGAATT TGGTGGTGGC TCAAGGGGCC GAAATGGTCG GCGATAAGGC GCTGGCGACC GAGACCTACA AGGCCATGGT CACCGATGAC CGCACGCGAT TTGTGGGGGT GCGCGGGCTG ATGCAGCAGC GACTCGATGA CGGCGATACC GACACGGCCC TGAAACTGGC CGAAAAGGCG CTGGTCCTGC GGCCCAAGAA CGCCGATGTG CAGACAACGC TGATCTCTTT GCAGTCCCGT CAGGAAGACT GGCAGGGTGC CCGTGGCACG CTGGCGGCTG CCCTGAAAGC AGGCAATGTG CCCCGCGATC TGCACCGCCG CCGCGACGCC GTTCTGGCCC TGGCCCATGC CCGCGACGCC ATGGCGGAGG GACAGGTCGT GACCGCCACC CGCGATGTGG CCGAGGCCAA CAGGCTTGCG CCGGGTCTTG TGCCAGCCGC CGTGATGTCC ACGCGCCTTG CGGTGGAGGC GGGCAACAAA CGCCAGGCCG CAAAGACGAT CCGCAAGGCC TGGGATCAAG CGCCGCATCC GGATCTGGCC GCCGCGTTCG CGCTGATTGA ACCCGATGAG ACGCCTGCCC TGCGCCTGCG CCGCTTCCGT CCGCTTCTGG GCAAGCACCC GACCCACCCC GAGGTGAAGA TGCTGGAGGC CGAGCTGCAC ATCGCCAACG AGGATTTCCC CGCCGCCCGC AAGGCCTTGG GTGATCTGGC AGAAAGTGCG CCCACCGCGC GGTCGTTGAC GATCATGGCT GCCGTCGAGC GGGGCGAAGG CTCCCCGGAC CGCATCGTGC GCGGCTGGCT GGCCCGCGCC GTCACTGCGC CCCGGGGCAA CCAGTGGCTC TGCGACAACT GCGGTCATGT GCATGAGGAT TGGACGCCGG TCTGCGTCAA TTGCGAGAGT TTCGACACGC TGGACTGGGC CGAGCCGCGT CAGTCGGAAA CCTCCCTCGC GGGTCCCACC CAGATGCTGC CCCTGATCGT GGGCGCACTG GAGGATCAAA GCGATGCGCC CGAGGCAGCG CCCGAGGCAG GGCCTGACGC GGAAGAGGAG GCCGAGATAC TCGACGACAC ACCCGCCGAG CCCGAAGCGG CCCAAGTCAC GCCGGATCCC ACGCCAGAGG CCGAGGTTTC ACGAAAGTAG
|
Protein sequence | MLLWSLLKII IFIAIVVGAV FGITLLTEMD NLGILIIFGR EFVITPLLAV IGAVILLLAV WILFKVVGLL VAFLRMLNGD ETALTRYWSR RSERKGYDAL GDAMMALAAG EGRLAIRKAE RARKALGRPE LTNLVVAQGA EMVGDKALAT ETYKAMVTDD RTRFVGVRGL MQQRLDDGDT DTALKLAEKA LVLRPKNADV QTTLISLQSR QEDWQGARGT LAAALKAGNV PRDLHRRRDA VLALAHARDA MAEGQVVTAT RDVAEANRLA PGLVPAAVMS TRLAVEAGNK RQAAKTIRKA WDQAPHPDLA AAFALIEPDE TPALRLRRFR PLLGKHPTHP EVKMLEAELH IANEDFPAAR KALGDLAESA PTARSLTIMA AVERGEGSPD RIVRGWLARA VTAPRGNQWL CDNCGHVHED WTPVCVNCES FDTLDWAEPR QSETSLAGPT QMLPLIVGAL EDQSDAPEAA PEAGPDAEEE AEILDDTPAE PEAAQVTPDP TPEAEVSRK
|
| |