| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3890 |
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| Symbol | |
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| ID | 3936371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3986743 |
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| End bp | 3987429 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906268 |
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| Product | RpsU-divergently transcribed |
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| Protein accession | YP_511832 |
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| Protein GI | 89056381 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5590] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02396] rpsU-divergently transcribed protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0740987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATA TGAGTGATGC GATCCTGGAT GCCGCCCGGA TGCATGTGCC GTTTGACGGC
TGGTCTGAGT CGAGTTTCGC CGCAGCCGTG GCCGATGCAG ACGTGCCGAT GGCCGACGCG
CGTGCTCTGT TCCCGCGGGG CGCTGTGGAT CTTGCCGTGG CCTTTCACCG ACGCGGTGAT
CGTGCGCTGG CAGAGGCCCT GGCAACCACG GATCTGGGCG CGATGCGCTT CCGCGAGAGG
GTGGCCCATG CGGTGAAGAC CCGGCTGGAT CTGGTGGAAG ACGACAAGGA AGCTGTGCGC
CGGGGGGCGA CGTTGTTTGC GTTGCCCATC TACGCCGCTG ACGGCGCGAA ACTTGTGTGG
GAAACCGCGG ACGTGATCTG GAGCGGGTTG GGCGATAGTT CGCAAGACCT CAACTGGTAT
ACGAAGCGCG CGACGCTTGC GGGCGTTTAC TCGGCAACGG TGCTTTACTG GCTGGGGGAT
CAGTCAGAAG GGCACAGTGC GACCTGGGCG TTTCTGGATC GGCGGATCGG TGATGTGATG
AAGATCGAGG ACGTCAAGGC GCGGGTACGC AGCAATGCGT TGCTGAAACC ATTTGCGGCG
GGGCTTGACC GTTTCGCGGC CTCGGTGCGC GCGCCGAGAG GAGGCGCGAG GGACGATTTG
CCCGGGCGCT GGACGCCACC GGCGTAG
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| Protein sequence | MTDMSDAILD AARMHVPFDG WSESSFAAAV ADADVPMADA RALFPRGAVD LAVAFHRRGD
RALAEALATT DLGAMRFRER VAHAVKTRLD LVEDDKEAVR RGATLFALPI YAADGAKLVW
ETADVIWSGL GDSSQDLNWY TKRATLAGVY SATVLYWLGD QSEGHSATWA FLDRRIGDVM
KIEDVKARVR SNALLKPFAA GLDRFAASVR APRGGARDDL PGRWTPPA
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