Gene Jann_3878 details

Gene Information

• Locus tag: Jann_3878
• Symbol: recR
• ID: 3936359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 3977057
• End bp: 3977656
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637906256
• Product: recombination protein RecR
• Protein accession: YP_511820
• Protein GI: 89056369
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.114118
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGCGGACA CCTCCAAAGA CATCGAAGAG CTGATCGGGA TTATGGCACG CCTGCCGGGT 
CTTGGGCCAC GGTCGGCTCG GCGTGCGGTG CTGACGCTGA TCAAGAAGCG TGGCGCTTTG 
ATGCGTCCCT TGGCCGAGAC CATGGCGCGC GTCGCCGAGA GCGCGCGGGA ATGTGTGAAC 
TGCGGCAATA TCGGCACGGG AGATCTCTGC GAGATCTGCA TGGATGTCCG CCGCGCGACT 
GGAGAGATCT GCGTCGTGGA GGACGTCGCA GATCTGTGGG CGATGGAACG AGGGCAGGCG 
TTCAAGGGCC GCTACCACGT CCTGGGGGGA ACATTATCGG CTTTGGATGA TGTGGGTCCC 
GAGGACCTGC GCATCCCCAA ACTGCGTGCG CGCATGGCCG ATGAAGGGAT CACCGAGGTC 
ATCCTGGCGC TGAACGCGAC GGTCGATGGC CAAACGACGG CGCATTACAT CGCCGATGAG 
CTGGCACCGA CGGGCGTAAC CCTGTCGTCG CTGGCACAGG GCGTGCCCAT CGGCGGAGAG 
TTGGACTACC TTGACGATGG CACCATTTCC GCAGCGTTGC GCGCGCGCAA AAGCCTGTGA 

 

Protein sequence

MADTSKDIEE LIGIMARLPG LGPRSARRAV LTLIKKRGAL MRPLAETMAR VAESARECVN 
CGNIGTGDLC EICMDVRRAT GEICVVEDVA DLWAMERGQA FKGRYHVLGG TLSALDDVGP 
EDLRIPKLRA RMADEGITEV ILALNATVDG QTTAHYIADE LAPTGVTLSS LAQGVPIGGE 
LDYLDDGTIS AALRARKSL