| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3863 |
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| Symbol | |
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| ID | 3936343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3960543 |
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| End bp | 3962474 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906241 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_511805 |
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| Protein GI | 89056354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC ATGATGCTTC GAAAGTGGCC TTGAAGGTCG CGGTGAAATC GCAGGACCAA
TTCCGCAAAC CCTGGGTTGC TACCGCTTTG CCGCTTGTCG GTGCCGCCTT GATCCTTGGC
CTCGGGGTCG TCAGCGCCAA GGCGCAGGAC GATGATCTTA TCACCACCCA TGGCATCTCC
ACCTTCGGCG AATTGCAGTA TGGCCCCGAC GCGCCGCACC TTGATTACGT GAACCCCGAT
GCGCCTAAGG GCGGCGAGAT GTCGTTTGCG TGGTCGTCGG GCTCGTTCGA CAGCATGCAT
CCCTATACCC GCGTCGGCCG CCCCGCGATC CTGTCGAGCG TGTTCTTCGA GTCGATGCTG
GAGGCCACTG CGGATGAAAT TGGCTCAGCC TATTGTCTGT TATGCGAGAG TTTCTCTTAC
CCCGAAGACC GGTCTTACGT GATCTTTACC CTGCGCGACG GTATCACCTT CTCGGACGGG
ACCCCCATGA CGTCGCAAGA TGTCCTTTTC TCCTACGAGA TCATGCGCGA CGAGGGGCTG
CCGTCCTTCC GCGCCTCCAT CCCACGCACG ATTGCGGGGG CAGAGATCGT CGATGAGCGC
TCGGTCCGGT TTGACTTCAA CCCTGACGCG CCGCTCCGGG GGCGCATCCA ATCCGCCGGT
GGCCTGCCGG TCTTCTCCGA AGCCAGCCAC ATCGCCGCAG GTATTCCGTT CGAAGACAGC
CGTTTGGAGC CGCTGGTAGG CTCCGGCCCC TATGTGCTTG GCGAAGTGCA ACCCGGCCAG
CGCGTTGTCT ACGAACGCAA CCCTGACTAC TGGGGCAGCG ACATCTGGAT CGCTCAGGGC
CGCAACAACT TTGACAGCAT CCGGATCGAG TTCTATGGCG ACAGCCTCGC GGCGTTCGAA
GGGTTCACGG CTGGCAACTA CACCTTCCGT CAGGAAAGCT CGTCCCAGGC CTGGGCCAAC
AACTACGATT TTCCGGCCCT GCAGAACGGC ACCGTGGTCC GGGCAGAGCT GCCAGACGGC
TCCATCGCGC CGGGTCAGTC GTTTATGATC AACCTGCGCC GCCCGCAGTT CCAGGATGTC
CGCGTGCGCA GCGCCCTGGC CCATATGTTC AATTTCGAGT GGACGAATGA GACGCTGTTC
TACGGCCTCT ATTCCCACAT CGGCAGCTTT TGGGAAAACA CCTGGATGGA GGCCGAAGGC
CTGCCGTCCG AGGCAGAACT GGCCTTGCTG GAACCGCTCC GCGACCGCCT GCCCGAAACT
GTCTTCACGC AAGAGGCCTA TTCCGTGCCG CCGTCGAACC CCGACCGAGC GCTGGATCGT
CGCCAATCGC GCCGCGCCAC GGCGTTGCTG GAGGAGGCGG GCTGGACCCC CGGTGATGAT
GGTATGCTGC GCGATGCGGC AGGCAATACG CTGGATGTGG AGTTCCTGAA CTCCTCACCG
CTGTTTGACC GCATCATCAA CCCCTACGTC GAAAACCTGC GCGCCATTGG TGTGAACGCC
TCGCTCAACC GCGTGGATAA CGCGCAGTTG CAACAGCGCG AGCGGGATGC AGATTTCGAC
ATGGTCACGG GTCACTTCCC CATGGGTTAT GAGCCCGGAT CCGGCCTGCG CCAGTATTTC
GGGTCTCTGG GCGCGGATGA ATCATTGTTC AACCAACCCG GCCTTGCCGA TGAAGCCATC
GACGAGCTGA TTGAGGTGGT CGTCAATGCT GAAACGCGTG AAGATCTGGA TGTGGCCGTC
ACCGCGCTGG ACCGGGTGCT GCGGGACCGC GTGATCCGTG TGGGACAATG GTACAACTCC
TCCCATTGGG TCGCCTATTA CGACATGTAT CGCTACCCCG AGGAGCTTCC GCCCTATTCG
CTTGGCTTCC TTGATTTCTG GTGGATCGAC CCGGAGGCCG AACAAGCCCT CCGCGATCAG
GGTGCGTTCT AG
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| Protein sequence | MQNHDASKVA LKVAVKSQDQ FRKPWVATAL PLVGAALILG LGVVSAKAQD DDLITTHGIS
TFGELQYGPD APHLDYVNPD APKGGEMSFA WSSGSFDSMH PYTRVGRPAI LSSVFFESML
EATADEIGSA YCLLCESFSY PEDRSYVIFT LRDGITFSDG TPMTSQDVLF SYEIMRDEGL
PSFRASIPRT IAGAEIVDER SVRFDFNPDA PLRGRIQSAG GLPVFSEASH IAAGIPFEDS
RLEPLVGSGP YVLGEVQPGQ RVVYERNPDY WGSDIWIAQG RNNFDSIRIE FYGDSLAAFE
GFTAGNYTFR QESSSQAWAN NYDFPALQNG TVVRAELPDG SIAPGQSFMI NLRRPQFQDV
RVRSALAHMF NFEWTNETLF YGLYSHIGSF WENTWMEAEG LPSEAELALL EPLRDRLPET
VFTQEAYSVP PSNPDRALDR RQSRRATALL EEAGWTPGDD GMLRDAAGNT LDVEFLNSSP
LFDRIINPYV ENLRAIGVNA SLNRVDNAQL QQRERDADFD MVTGHFPMGY EPGSGLRQYF
GSLGADESLF NQPGLADEAI DELIEVVVNA ETREDLDVAV TALDRVLRDR VIRVGQWYNS
SHWVAYYDMY RYPEELPPYS LGFLDFWWID PEAEQALRDQ GAF
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