| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3859 |
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| Symbol | |
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| ID | 3936339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3955112 |
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| End bp | 3956440 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906237 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_511801 |
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| Protein GI | 89056350 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.652374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCT ATTCTCAACT GCGGCGTTTC GGCGTCCTCG ATACCCATGT GCCCCGGTAC
ACGTCCTACC CGCCCACGCC GCATTTCACA GACACGGTCG GCGCGATGGA TTATGGCCGT
TGGCTGGCAC GGATCCCGGA GGGGTCGGAG GTCTCTCTCT ACATACATAT TCCCTTCTGC
CAGCGGCTTT GCTGGTTTTG TTCGGCGCGC ACCCAGGGCG CGCCGGGCGG GGCGCCCGTG
GCCTCCTATG TCGATACTCT GATCCGCGAG GCCCGGGCCG TGGGGGCCGC TTTGCCACCC
GGCGTGCGGG CGAGGAGTGT CTATTGGGGC GGCGGAACGC CGACAATTCT GTCGCCTGCC
GACATCACGC GCCTGTCGTG CGCCGTGCAC AGCGCTATTC CTTTGACCAA TGACGCAGAG
ATTACGGTTG AGGTCGACCC GACCGAAATT GACGACGCGC GTATGGATGC ACTGGCCCAG
ATGGGCATGA CCCGCGCGTC CATCGGGGTG CAGGATTTCG ACCCAGAGAT CCAGAAAATC
ATCGGACGGG CACAAAGTTT CGAGGCCACA AAGGCCGCCA TCGACGGGCT CCGCGCCCGG
GGCGTGGACG GCCTGACCAT GGGCCTTCTC TACGGCTTGC CAAAACAACG GCGCACCAGC
CTGGCGCGTC TGACGCAGTT GCTTCTGACG CTGTCACCGG ACCGCGTCAC GGTGCAGCCC
TATGCCCATG TGCCCGCAAT TGCGCGCCGA CAAAGCCTGA TCCCCACGGC GGATCTACCC
ACGCCCGAAG GCCAGTTGGC GCTGTTCGAT GCTGCCGCGG GGGTCCTGCG GTGGGATGGG
TTTGACCCCA TCGGCATTGA CCATTTCGCT CTTCCCTCAG ATGCGCTGTC GACGGCTTCA
AGCCGGGGCG ATCTGCGGCG CTGTTTTCAG GGCTACACCG ACAACCCTGG CGGCGTGCTT
CTGGGCCTCG GGGCCTCGGC GGTGTCCCGG CTGCCACAGG GCTACGCCCA GAACGCGCCC
GGCACCTCGG CTTACCTGAA GGCCGTTGCG GCGGGGCGCT TCGCCACGGC ACGCGGCCAT
CGTTTGAGCA AAGACGACGC TTTGCGCGGC CGTATGATCG AGATGATCCT GTGCGATTTC
CGGATCGACA TCGCCAAATT GTTGGCCGAA AGGCTGGGAC CGGTGGCGCG AATTGAGGAT
TTGCTGACCC ATATGTTGCG CCAGTTCCCC GGTCAGATCG CACGTTTTGA GGGCGGCCTC
AGGGTGCGGG CAAATTCCAA GGCGATGGTC CGCGTGATCG CGCGCGCGCT GGACGCCTAC
GCACCTTAG
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| Protein sequence | MDLYSQLRRF GVLDTHVPRY TSYPPTPHFT DTVGAMDYGR WLARIPEGSE VSLYIHIPFC
QRLCWFCSAR TQGAPGGAPV ASYVDTLIRE ARAVGAALPP GVRARSVYWG GGTPTILSPA
DITRLSCAVH SAIPLTNDAE ITVEVDPTEI DDARMDALAQ MGMTRASIGV QDFDPEIQKI
IGRAQSFEAT KAAIDGLRAR GVDGLTMGLL YGLPKQRRTS LARLTQLLLT LSPDRVTVQP
YAHVPAIARR QSLIPTADLP TPEGQLALFD AAAGVLRWDG FDPIGIDHFA LPSDALSTAS
SRGDLRRCFQ GYTDNPGGVL LGLGASAVSR LPQGYAQNAP GTSAYLKAVA AGRFATARGH
RLSKDDALRG RMIEMILCDF RIDIAKLLAE RLGPVARIED LLTHMLRQFP GQIARFEGGL
RVRANSKAMV RVIARALDAY AP
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