| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3846 |
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| Symbol | hemE |
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| ID | 3936326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3941169 |
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| End bp | 3942200 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906224 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_511788 |
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| Protein GI | 89056337 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA AGAAAAAACT TCTGCGCTCG CTCGCGGGCG AGGCCATGGA CGTGCCGCCC
GTATGGTTGA TGCGCCAGGC CGGGCGCTAT TTGCCGGAAT ATCGCGCCAC CCGCGCGCAG
GCAGGCGACT TCCTGTCACT GTGCTATAAC CCTGAATTGG CAGCGGAAGT TACGCTGCAA
CCGATCCGGC GCTTTGATTT TGATGCGTCG ATCTTGTTCG CCGACATCCT GCTCATCCCG
CAGGCACTTG GCGCCAACCT GTGGTTCGTC ACTGGTGAGG GGCCGCGTTT GTCGACCATC
ACTGACGCGT CTGGCATGGC GCGGATGAAG ACGGCGGACG ACATTCATGA GACGCTGAAC
CCCATCTACG AGACGGTAAA GATCCTGGCG CAGGAACTGC CGAAGGAGAC CACGCTGATC
GGTTTCGCGG GCGCGCCCTG GACAGTGGCT ACCTACATGA TCGCGGGTCG CGGCACGCCG
GACCAAGCCC CCGCCCATAA GCTGCGCGAA GGCGACCCGG AGACCTTCGA CAAGCTGATG
GACCTGATCA CCGCCGCAAC GATTGAATAT CTGGATATGC AGGTTCAGGC GGGCGCTGAA
GTCGTGAAGC TCTTCGACTC CTGGGCCGGG TCCCTCAAGG GCGAGGCGTT CGATAAATAC
GCGCTCGCCC CCGCGAAACG CATCATCTCA GAGCTGAAGT CACGCCACCC CGATCTGCCG
ATCATCGCCT TCCCGCGCGA GGCGGGAGAG AAATACATCG GTTTCGCCAA CGCCGTGGGA
GCCGATTGTC TGGCCATCGA CACCTCCGTC GACGCCATCT GGGCGGCAGA AAACCTACAG
ACAGACGGCT GTGTGCAGGG CAACCTTGAT CCCAAATTGA TGGTGACCGG AGGCGAGGCT
TTGGCATCCG AGGCCCGGCG TATCCGCGAT GCCCTGAAGG GTGGGCCGCA TATCTTCAAT
CTGGGCCACG GCATCACGCC GGACGCGGAC CCGGAGAATG TGCATATTCT GCTGGATGCG
ATCCGGAGCT AA
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| Protein sequence | MADKKKLLRS LAGEAMDVPP VWLMRQAGRY LPEYRATRAQ AGDFLSLCYN PELAAEVTLQ
PIRRFDFDAS ILFADILLIP QALGANLWFV TGEGPRLSTI TDASGMARMK TADDIHETLN
PIYETVKILA QELPKETTLI GFAGAPWTVA TYMIAGRGTP DQAPAHKLRE GDPETFDKLM
DLITAATIEY LDMQVQAGAE VVKLFDSWAG SLKGEAFDKY ALAPAKRIIS ELKSRHPDLP
IIAFPREAGE KYIGFANAVG ADCLAIDTSV DAIWAAENLQ TDGCVQGNLD PKLMVTGGEA
LASEARRIRD ALKGGPHIFN LGHGITPDAD PENVHILLDA IRS
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