| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3820 |
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| Symbol | |
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| ID | 3936300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3911005 |
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| End bp | 3912573 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906198 |
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| Product | hypothetical protein |
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| Protein accession | YP_511762 |
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| Protein GI | 89056311 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.366241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.547453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA CGGTCGGCGA AGTGCTCATC ACGCTGTTGG AGCGGCGCGG GGTGGCTCAT
ATCTTTGGCA TCCCCGGGGT CCACACGGTG GAGATGTATC GTGGCCTCGA CGGCTCCTCC
ATTCGCCACA TCACGCCCCG GCATGAACAA AGTGCGGGCT TTATGGCCGA TGGCTACGCG
CGGGCGACGG GCAAGCCGGG CGTTTGCTTG CTGATCACCG GGCCGGGGGT GACCAATGCG
ATCACGCCCA TGGCCCAGGC CCGCGCCGAC AGCGTGCCGA TGCTGGTGAT TTCCGGCGTG
AACCGGGCCG CGACGTTCGG GCATGAGGAG GGGTACCTCC ACGAGTTGCC TGACCAGCAG
GCGATGATGG CGCAGGTGGC GTTACTGTCC CAGACCCTGC ACCGGGCCGA AGATCTGGAA
CGTGTCGTAG ACCGCGCGTT TGCGGCGATG ACCGGCGGAC GCCCCGGGCC CGTCCACATT
GAGGTGCCGC TGGATGTGAT GAAACAACAG ATCGCCGTGC CGCCTGAGCG GGCCGAGGTG
AAGATCCGCC GCATGCCCGA CCCTGCCCTG ATTGCTGATG CACAAGCGCG CCTGAGCAAG
GCCAAGCGTC CGCTGATCCT TGCGGGCGGC GGAGCGGTGG GTGCGGCGGA CGCCCTGCAA
ACCCTCGCCG AAACGCTTGA TGCACCGGTG GTGACCACCA CCAACGGACG GGGCATTCTG
GGCGGCCACC CCCTCTGCAT TCCCGCAAGT CCAACGCTTC CTGCGGTGCG GGACCTGATG
GCCGATGCGG ACGTTGTCCT TGCCGTCGGC ACCCAGTTTG GGCGGACGGA TTATGATATG
TACGACGACG GCGAAGCACC CGAGATCGCC CACCTTATCC GCATTGACTG TGACCCGGTG
CAGATCACCC GTGGGCGTGT GCCGGACATG GCGATTGTGG CGGATGCTCA AGTGGCAGTT
GCGGCGCTGG GGCTCCAGCC CCAAACCAGC GAAGGTGAAA GCCGCGCAGA CGCCACGCGG
ATAAGCGCCT TGAACAGCCT CGATGCCACG TATCAATCGC ATATCGATGT CATTGACACG
ATAACCCAGG CCATCCCCGG CGTTCGCATC GTTGGCGATA GCACGCAAGT GATCTACGCG
GGCAACATGT ACGCGGATAT CGCGCAGCCC TGGGGCTGGT TCAATGCGGC CACCGGGTAT
GGCGCACTCG GCTACGGCCC GTCTGCGGCC ATCGGAGCGG CTTTGGGCGA CGCCGCGCCC
GTGGTGTGTA TCACCGGCGA CGGTGGCTTG CAGTTCTGTC TGTCGGAACT GGGGACCGCG
ATGGACGAAA CCACGCCCGT CATCTTCGTG GTCTGGAACA ACAACGGCTA TCAGGAGATT
GAGCGGTTCA TGGTCGACCA TGACATCAAG CCAGAAGGGG TCACGCCTTC CGCACCGGAT
TTCGCCGCTG TTGCCCGTGC CTATGGTATG CCTGCCGAGC GGGTGGAGGG CATCGACACC
CTTGGCTCTG CCCTGACCCG CGCCAAAGCG GCGGGCAGCG CGTATCTCAT CGACCTGATC
GTTCCGTAG
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| Protein sequence | MMKTVGEVLI TLLERRGVAH IFGIPGVHTV EMYRGLDGSS IRHITPRHEQ SAGFMADGYA
RATGKPGVCL LITGPGVTNA ITPMAQARAD SVPMLVISGV NRAATFGHEE GYLHELPDQQ
AMMAQVALLS QTLHRAEDLE RVVDRAFAAM TGGRPGPVHI EVPLDVMKQQ IAVPPERAEV
KIRRMPDPAL IADAQARLSK AKRPLILAGG GAVGAADALQ TLAETLDAPV VTTTNGRGIL
GGHPLCIPAS PTLPAVRDLM ADADVVLAVG TQFGRTDYDM YDDGEAPEIA HLIRIDCDPV
QITRGRVPDM AIVADAQVAV AALGLQPQTS EGESRADATR ISALNSLDAT YQSHIDVIDT
ITQAIPGVRI VGDSTQVIYA GNMYADIAQP WGWFNAATGY GALGYGPSAA IGAALGDAAP
VVCITGDGGL QFCLSELGTA MDETTPVIFV VWNNNGYQEI ERFMVDHDIK PEGVTPSAPD
FAAVARAYGM PAERVEGIDT LGSALTRAKA AGSAYLIDLI VP
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